RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 OR10J3Q5JRS4 329 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 TMEM14EPQ6UXP3 125 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 SSX7Q7RTT5 188 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 OR11H7Q8NGC8 314 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 PPP1R1CQ8WVI7 109 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 C17orf77Q96MU5 243 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 Q9HAA7 133 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 LYRM2Q9NU23 88 aaPredicted RBP3.85□□□□□ -1.79
CLIP1-217ENST00000543205 MRPL36Q9P0J6 103 aaKnown RBP3.85□□□□□ -1.79
CLIP1-217ENST00000543205 UFC1Q9Y3C8 167 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 ZFP92A6NM28 416 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 MPC2O95563 127 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 HBE1P02100 147 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 IGLC1P0CG04 106 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 SULT1A1P50225 295 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 RANP62826 216 aaKnown RBP3.84□□□□□ -1.79
CLIP1-217ENST00000543205 HBG1P69891 147 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 HBG2P69892 147 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 SRSF9Q13242 221 aaKnown RBP eCLIP3.84□□□□□ -1.79
CLIP1-217ENST00000543205 OR5I1Q13606 314 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 GUK1Q16774 197 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 UNQ9165/PRO28630Q6UXU0 137 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 ACOT7LQ6ZUV0 252 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 C15orf54Q8N8G6 183 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 Q8WTZ3 238 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 ASB13Q8WXK3 278 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 SLC25A31Q9H0C2 315 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 C11orf1Q9H5F2 150 aa3.84□□□□□ -1.79
CLIP1-217ENST00000543205 IGHV3OR16-8A0A075B7F1 116 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 KIR2DL5BA0A0G2JN68 375 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 KIR2DL5BA0A0G2JPC4 375 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 C2orf70A6NJV1 201 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 PMS2P5A8MQ11 134 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 CCNKO75909 580 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 CST7O76096 145 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 IGKV1-17P01599 117 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 GIPP09681 153 aaPredicted RBP3.83□□□□□ -1.8
CLIP1-217ENST00000543205 S100A11P31949 105 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 YPEL3P61236 119 aaPredicted RBP3.83□□□□□ -1.8
CLIP1-217ENST00000543205 SLC38A11Q08AI6 406 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 IL34Q6ZMJ4 242 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 KIR2DL5AQ8N109 375 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 TMEM252Q8N6L7 170 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 DYNLRB2Q8TF09 96 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 TMEM190Q8WZ59 177 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 MARC2Q969Z3 335 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 C2orf48Q96LS8 159 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 GINS3Q9BRX5 216 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 GGACTQ9BVM4 153 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 DAZ1Q9NQZ3 744 aaKnown RBP3.83□□□□□ -1.8
CLIP1-217ENST00000543205 OR5AC2Q9NZP5 309 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 Q9UF83 564 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 TRAV14DV4A0A0A6YYC5 116 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 IGSF23A1L1A6 192 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 A8MWP6 167 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 FNDC10F2Z333 226 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 K7EMT4 169 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 ZNF207O43670 478 aaKnown RBP3.83□□□□□ -1.8
CLIP1-217ENST00000543205 NUDT3O95989 172 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 TOMM40O96008 361 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 FOLR2P14207 255 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 CBLN1P23435 193 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 ARL16Q0P5N6 197 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 TOMM20LQ6UXN7 152 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 TMEM144Q7Z5S9 345 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 URB1-AS1Q96HZ7 61 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 NARS2Q96I59 477 aaKnown RBP3.83□□□□□ -1.8
CLIP1-217ENST00000543205 TRGV9Q99603 122 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 RNF126Q9BV68 326 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 NPVFQ9HCQ7 196 aa3.83□□□□□ -1.8
CLIP1-217ENST00000543205 MRPL27Q9P0M9 148 aaKnown RBP3.83□□□□□ -1.8
CLIP1-217ENST00000543205 IGKV1D-37A0A075B6S9 117 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 M0R036 132 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 CDK2AP2O75956 126 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 IL4P05112 153 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 IGHV4-30-4P0DP06 118 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 PSG1P11464 419 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 NPPCP23582 126 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 RPL12P30050 165 aaKnown RBP3.82□□□□□ -1.8
CLIP1-217ENST00000543205 RPL24P83731 157 aaKnown RBP3.82□□□□□ -1.8
CLIP1-217ENST00000543205 DEFA6Q01524 100 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 ZNF90Q03938 601 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 BAXQ07812 192 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 OR2F1Q13607 317 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 LCN12Q6JVE5 192 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 HSD17B11Q8NBQ5 300 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 OR51G1Q8NGK1 321 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 OR2K2Q8NGT1 345 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 OR2T35Q8NGX2 323 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 METTL26Q96S19 204 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 PBDC1Q9BVG4 233 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 TMEM147Q9BVK8 224 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 UQCC1Q9NVA1 299 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 IGKV1OR2-108A0A075B7D4 117 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 IGHV3-49A0A0A0MS15 119 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 IGLV9-49A0A0B4J1Y8 123 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 IGHV7-4-1A0A0J9YVY3 117 aa3.82□□□□□ -1.8
CLIP1-217ENST00000543205 A0A1W2PS18 150 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms