RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SH3BGRL3Q9H299 93 aa13.36□□□□□ -0.27
COPS7A-216ENST00000543170 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
COPS7A-216ENST00000543170 CYTL1Q9NRR1 136 aa13.36□□□□□ -0.27
COPS7A-216ENST00000543170 A0A0D9SG52 128 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 A0A0J9YWU9 116 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 OR10J4P0C629 311 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 ZNF705DP0CH99 300 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-216ENST00000543170 ZNF705BP0CI00 300 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-216ENST00000543170 MIFP14174 115 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 CDC34P49427 236 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-216ENST00000543170 FAM122CQ6P4D5 195 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 ZNF705AQ6ZN79 300 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-216ENST00000543170 LYPD1Q8N2G4 141 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 ARPC5LQ9BPX5 153 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 X6R8D5 127 aa13.35□□□□□ -0.27
COPS7A-216ENST00000543170 ZNF705FA8MVS1 300 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-216ENST00000543170 BOLA2-SMG1P6H3BVE0 249 aa13.34□□□□□ -0.27
COPS7A-216ENST00000543170 RPP25LQ8N5L8 163 aaKnown RBP13.34□□□□□ -0.27
COPS7A-216ENST00000543170 Q8NAQ8 132 aa13.34□□□□□ -0.27
COPS7A-216ENST00000543170 OR10J6PQ8NGY7 276 aa13.34□□□□□ -0.27
COPS7A-216ENST00000543170 PHYHIPLQ96FC7 376 aa13.34□□□□□ -0.27
COPS7A-216ENST00000543170 NEU1Q99519 415 aa13.34□□□□□ -0.27
COPS7A-216ENST00000543170 STARD9Q9P2P6 4700 aa13.33□□□□□ -0.28
COPS7A-216ENST00000543170 STAG3L2P0CL84 134 aa13.33□□□□□ -0.28
COPS7A-216ENST00000543170 STAG3L3P0CL85 134 aa13.33□□□□□ -0.28
COPS7A-216ENST00000543170 FXYD7P58549 80 aa13.33□□□□□ -0.28
COPS7A-216ENST00000543170 IGF2BP2-AS1Q96M15 143 aa13.33□□□□□ -0.28
COPS7A-216ENST00000543170 ODF3Q96PU9 254 aa13.33□□□□□ -0.28
COPS7A-216ENST00000543170 PRAC2D3DTV9 90 aa13.32□□□□□ -0.28
COPS7A-216ENST00000543170 NPIPB6E9PJ23 425 aa13.32□□□□□ -0.28
COPS7A-216ENST00000543170 M0R3E3 92 aa13.32□□□□□ -0.28
COPS7A-216ENST00000543170 EXOC3-AS1Q8N2X6 119 aa13.32□□□□□ -0.28
COPS7A-216ENST00000543170 GOLT1BQ9Y3E0 138 aa13.32□□□□□ -0.28
COPS7A-216ENST00000543170 KANTRA0A1W2PQU2 76 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 SMIM9A6NGZ8 99 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 M0R2Z0 102 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 CRXO43186 299 aaPredicted RBP13.31□□□□□ -0.28
COPS7A-216ENST00000543170 BCL2L11O43521 198 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 INSP01308 110 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 ICAM4Q14773 271 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 RAB24Q969Q5 203 aa13.31□□□□□ -0.28
COPS7A-216ENST00000543170 ACTR3CQ9C0K3 210 aaPredicted RBP13.31□□□□□ -0.28
COPS7A-216ENST00000543170 IGHV4-28A0A0C4DH34 117 aa13.3□□□□□ -0.28
COPS7A-216ENST00000543170 ARL14EPLP0DKL9 152 aa13.3□□□□□ -0.28
COPS7A-216ENST00000543170 CDKN1BP46527 198 aa13.3□□□□□ -0.28
COPS7A-216ENST00000543170 C1orf158Q8N1D5 194 aa13.3□□□□□ -0.28
COPS7A-216ENST00000543170 Q9H3A6 140 aa13.3□□□□□ -0.28
COPS7A-216ENST00000543170 PPP1R14DQ9NXH3 145 aa13.3□□□□□ -0.28
COPS7A-216ENST00000543170 CSMD3Q7Z407 3707 aa13.29□□□□□ -0.28
COPS7A-216ENST00000543170 EIF3GO75821 320 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPS7A-216ENST00000543170 C1QBP02746 253 aa13.29□□□□□ -0.28
COPS7A-216ENST00000543170 TSPOP30536 169 aa13.29□□□□□ -0.28
COPS7A-216ENST00000543170 AKR1C8PQ5T2L2 129 aa13.29□□□□□ -0.28
COPS7A-216ENST00000543170 CASC10Q5T4H9 136 aa13.29□□□□□ -0.28
COPS7A-216ENST00000543170 AKAP14Q86UN6 197 aa13.29□□□□□ -0.28
COPS7A-216ENST00000543170 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
COPS7A-216ENST00000543170 CTXND1A0A1B0GTU2 59 aa13.28□□□□□ -0.28
COPS7A-216ENST00000543170 HMGB3O15347 200 aaKnown RBP13.28□□□□□ -0.28
COPS7A-216ENST00000543170 RANP62826 216 aaKnown RBP13.28□□□□□ -0.28
COPS7A-216ENST00000543170 EIF5AP63241 154 aaKnown RBP13.28□□□□□ -0.28
COPS7A-216ENST00000543170 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
COPS7A-216ENST00000543170 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
COPS7A-216ENST00000543170 ARL6IP6Q8N6S5 226 aa13.28□□□□□ -0.28
COPS7A-216ENST00000543170 C20orf144Q9BQM9 153 aa13.28□□□□□ -0.28
COPS7A-216ENST00000543170 OTORQ9NRC9 128 aa13.28□□□□□ -0.28
COPS7A-216ENST00000543170 hCG_2014768A0A024R1R8 64 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 RBAKDNA6NC62 111 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 CXorf1O96002 111 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 SEC11BP0C7V7 166 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 RBMY1A1P0DJD3 496 aaKnown RBP13.27□□□□□ -0.29
COPS7A-216ENST00000543170 RBMY1CP0DJD4 496 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 PRB4P10163 310 aaPredicted RBP13.27□□□□□ -0.29
COPS7A-216ENST00000543170 GCHFRP30047 84 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 CSN1S1P47710 185 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 RBMY1FQ15415 496 aaKnown RBP13.27□□□□□ -0.29
COPS7A-216ENST00000543170 FAM74A1Q5RGS3 127 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 TMUB2Q71RG4 321 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 LINC00477Q96M19 166 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 ZNF471Q9BX82 626 aaPredicted RBP13.27□□□□□ -0.29
COPS7A-216ENST00000543170 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.29
COPS7A-216ENST00000543170 TMEM189A5PLL7 270 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 PFDN1O60925 122 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
COPS7A-216ENST00000543170 CT45A10P0DMU9 189 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 LEPP41159 167 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 ZNF726P1Q15940 193 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 SSX7Q7RTT5 188 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 STOML3Q8TAV4 291 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 HYLS1Q96M11 299 aa13.26□□□□□ -0.29
COPS7A-216ENST00000543170 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
COPS7A-216ENST00000543170 IGHV3OR16-12A0A075B7B8 117 aa13.25□□□□□ -0.29
COPS7A-216ENST00000543170 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
COPS7A-216ENST00000543170 DEFB4AO15263 64 aa13.25□□□□□ -0.29
COPS7A-216ENST00000543170 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
COPS7A-216ENST00000543170 HBE1P02100 147 aa13.25□□□□□ -0.29
COPS7A-216ENST00000543170 FAM19A4Q96LR4 140 aa13.25□□□□□ -0.29
COPS7A-216ENST00000543170 TMEM208Q9BTX3 173 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms