RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 UNQ5815/PRO19632Q6UWF5 114 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 FOXI2Q6ZQN5 318 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 GTF2H5Q6ZYL4 71 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 FAM19A3Q7Z5A8 133 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM86AQ8N2M4 240 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 LINC00471Q8N535 108 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF433Q8N7K0 673 aaPredicted RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 ZDHHC22Q8N966 263 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM229BQ8NBD8 167 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TSTD1Q8NFU3 115 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 OR10D3Q8NH80 312 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 RBMXL1Q96E39 390 aaKnown RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TVP23CQ96ET8 276 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 CYYR1Q96J86 154 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 BTF3L4Q96K17 158 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 AQP10Q96PS8 301 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 RTBDNQ9BSG5 229 aaPredicted RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 PLA2G2FQ9BZM2 168 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 BANF2Q9H503 90 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF331Q9NQX6 463 aaPredicted RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 ZNF355PQ9NSJ1 428 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TMEM106BQ9NUM4 274 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 SS18L2Q9UHA2 77 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 TAC3Q9UHF0 121 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 ERG28Q9UKR5 140 aa2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 NOP16Q9Y3C1 178 aaKnown RBP2.59□□□□□ -1.99
SFSWAP-211ENST00000542813 EML5Q05BV3 1969 aa2.59□□□□□ -2
SFSWAP-211ENST00000542813 F8P00451 2351 aa2.59□□□□□ -2
SFSWAP-211ENST00000542813 AHCTF1Q8WYP5 2266 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 TICRRQ7Z2Z1 1910 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 DOCK8Q8NF50 2099 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 IGLV3-16A0A075B6K0 115 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 A0A0G2JMM0 328 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 A0A1W2PPB8 328 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 ZNF860A6NHJ4 632 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 KIR3DP1A8MWS1 328 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 TMEM250H0YL14 139 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 J3QR89 54 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 GEMIN2O14893 280 aaKnown RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 TAX1BP3O14907 124 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 ZNF207O43670 478 aaKnown RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 HYPMO75409 117 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 CNIH1O95406 144 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 REG1AP05451 166 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 MDKP21741 143 aaPredicted RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 PPP1CCP36873 323 aaKnown RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 OPRK1P41145 380 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 GNG4P50150 75 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 RPS24P62847 133 aaKnown RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 TMEM267Q0VDI3 215 aaPredicted RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 HIST3H3Q16695 136 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 LUZP6Q538Z0 58 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 C1orf195Q5TG92 126 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 AMMECR1LQ6DCA0 310 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 MORN3Q6PF18 240 aaPredicted RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 AGTRAPQ6RW13 159 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 TOMM20LQ6UXN7 152 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 ZNF550Q7Z398 422 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 C1orf174Q8IYL3 243 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 ZNF101Q8IZC7 436 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 SMIM20Q8N5G0 67 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 DEFB125Q8N687 156 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 CYB561D1Q8N8Q1 229 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 APCDD1LQ8NCL9 501 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 OR10AC1Q8NH08 325 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 OR8S1Q8NH09 359 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 PFN4Q8NHR9 129 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 ZNF563Q8TA94 476 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 LINC01560Q8TB33 94 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 ZNF418Q8TF45 676 aaPredicted RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 S100A16Q96FQ6 103 aaKnown RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 NDFIP1Q9BT67 221 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 BCL2L10Q9HD36 194 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 CMC2Q9NRP2 79 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 MED29Q9NX70 200 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 C21orf62Q9NYP8 219 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 HSPB8Q9UJY1 196 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 VPREB3Q9UKI3 123 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 MCTS1Q9ULC4 181 aaKnown RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 POLR1DQ9Y2S0 133 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 STAB1Q9NY15 2570 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 UTP20O75691 2785 aaKnown RBP2.58□□□□□ -2
SFSWAP-211ENST00000542813 VWA8A3KMH1 1905 aa2.58□□□□□ -2
SFSWAP-211ENST00000542813 NBEAL1Q6ZS30 2694 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 BOD1L1Q8NFC6 3051 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 CENPVL3A0A0U1RRI6 287 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 TEX50A0A1B0GTY4 177 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 MAP1LC3B2A6NCE7 125 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 OR4C45A6NMZ5 311 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 ISLRO14498 428 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 CXorf1O96002 111 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 NRASP01111 189 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 SRP19P09132 144 aaKnown RBP2.57□□□□□ -2
SFSWAP-211ENST00000542813 ZNF708P17019 499 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 TPPP2P59282 170 aa2.57□□□□□ -2
SFSWAP-211ENST00000542813 DAD1P61803 113 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms