RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 FAM90A13PP0C7W8 464 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 FAM90A24PP0C7X0 464 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 ASIPP42127 132 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 GFRALQ6UXV0 394 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 FAM57AQ8TBR7 257 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 A0A0G2JRQ6 117 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 FAM90A9PA6NNJ1 464 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 PRRG2O14669 202 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 CNTFRP26992 372 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 KLF5Q13887 457 aaPredicted RBP8.87□□□□□ -0.99
CDH3-203ENST00000542274 TAL2Q16559 108 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 RTL8BQ17RB0 113 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 KLF17Q5JT82 389 aaPredicted RBP8.87□□□□□ -0.99
CDH3-203ENST00000542274 LINC01545Q5VT33 79 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 C11orf53Q8IXP5 236 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 URB1-AS1Q96HZ7 61 aa8.87□□□□□ -0.99
CDH3-203ENST00000542274 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 IQCF6A8MYZ5 107 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 HSPE1P61604 102 aaKnown RBP8.86□□□□□ -0.99
CDH3-203ENST00000542274 PKD1L2Q7Z442 2459 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 PLCE1Q9P212 2302 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 K7EMI3 77 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 ATP5G3P48201 142 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 ID3Q02535 119 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 DTX2Q86UW9 622 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 PRORYQ9H606 182 aa8.86□□□□□ -0.99
CDH3-203ENST00000542274 IGLV2-14P01704 120 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 ZNF645Q8N7E2 425 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 SPANXCQ9NY87 97 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 A8MWL6 223 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 RRHO14718 337 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 Q6ZS49 121 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 PLPPR2Q96GM1 343 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 V9GYV3 84 aa8.85□□□□□ -0.99
CDH3-203ENST00000542274 POLEQ07864 2286 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 TRAV8-1A0A0A6YYK1 113 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 TEX50A0A1B0GTY4 177 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 CGB1A6NKQ9 187 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 H3BP45 60 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 M0R2P5 195 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 LINC00205P59089 165 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 DPH3Q96FX2 82 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 DCTN5Q9BTE1 182 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 CTXND1A0A1B0GTU2 59 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 M0R1B8 84 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 PF4P02776 101 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 ZNF497Q6ZNH5 498 aa8.84□□□□□ -0.99
CDH3-203ENST00000542274 ACACBO00763 2458 aa8.83□□□□□ -1
CDH3-203ENST00000542274 TMSB15BA0A087X1C1 80 aa8.83□□□□□ -1
CDH3-203ENST00000542274 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
CDH3-203ENST00000542274 A0A0G2JNJ9 132 aa8.83□□□□□ -1
CDH3-203ENST00000542274 GAGE2AQ6NT46 116 aa8.83□□□□□ -1
CDH3-203ENST00000542274 CIARTQ8N365 385 aaPredicted RBP8.83□□□□□ -1
CDH3-203ENST00000542274 IGFBPL1Q8WX77 278 aa8.83□□□□□ -1
CDH3-203ENST00000542274 Q9UFV3 132 aa8.83□□□□□ -1
CDH3-203ENST00000542274 PYGO1Q9Y3Y4 419 aa8.83□□□□□ -1
CDH3-203ENST00000542274 IGHV3-43A0A0B4J1X8 118 aa8.83□□□□□ -1
CDH3-203ENST00000542274 UQCRQO14949 82 aa8.83□□□□□ -1
CDH3-203ENST00000542274 IGKV1-39P01597 117 aa8.83□□□□□ -1
CDH3-203ENST00000542274 IGKV1D-39P04432 117 aa8.83□□□□□ -1
CDH3-203ENST00000542274 IGHV3-43DP0DP04 118 aa8.83□□□□□ -1
CDH3-203ENST00000542274 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
CDH3-203ENST00000542274 KLRB1Q12918 225 aa8.83□□□□□ -1
CDH3-203ENST00000542274 FAM201AQ5SY85 155 aa8.83□□□□□ -1
CDH3-203ENST00000542274 Q6ZRM9 215 aa8.83□□□□□ -1
CDH3-203ENST00000542274 C15orf53Q8NAA6 179 aa8.83□□□□□ -1
CDH3-203ENST00000542274 NUP35Q8NFH5 326 aa8.83□□□□□ -1
CDH3-203ENST00000542274 RFESDQ8TAC1 157 aa8.83□□□□□ -1
CDH3-203ENST00000542274 SLC25A15Q9Y619 301 aa8.83□□□□□ -1
CDH3-203ENST00000542274 IGLV1-44P01699 117 aa8.82□□□□□ -1
CDH3-203ENST00000542274 IGHV3-13P01766 116 aa8.82□□□□□ -1
CDH3-203ENST00000542274 RRN3P1Q2M238 152 aa8.82□□□□□ -1
CDH3-203ENST00000542274 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
CDH3-203ENST00000542274 PCP2Q8IVA1 136 aa8.82□□□□□ -1
CDH3-203ENST00000542274 RND1Q92730 232 aa8.82□□□□□ -1
CDH3-203ENST00000542274 LINC00526Q96FQ7 95 aa8.82□□□□□ -1
CDH3-203ENST00000542274 USF3Q68DE3 2245 aa8.82□□□□□ -1
CDH3-203ENST00000542274 SVEP1Q4LDE5 3571 aa8.82□□□□□ -1
CDH3-203ENST00000542274 LRBAP50851 2863 aa8.82□□□□□ -1
CDH3-203ENST00000542274 IGHV3OR15-7A0A075B7D8 119 aa8.82□□□□□ -1
CDH3-203ENST00000542274 CD7P09564 240 aa8.82□□□□□ -1
CDH3-203ENST00000542274 C3orf36Q3SXR2 165 aa8.82□□□□□ -1
CDH3-203ENST00000542274 LINC00596Q86U02 117 aa8.82□□□□□ -1
CDH3-203ENST00000542274 CEND1Q8N111 149 aa8.82□□□□□ -1
CDH3-203ENST00000542274 DEFB108AA8MXU0 73 aa8.82□□□□□ -1
CDH3-203ENST00000542274 ZNF493Q6ZR52 646 aa8.82□□□□□ -1
CDH3-203ENST00000542274 TMEM147Q9BVK8 224 aa8.82□□□□□ -1
CDH3-203ENST00000542274 ZNF331Q9NQX6 463 aaPredicted RBP8.82□□□□□ -1
CDH3-203ENST00000542274 PKDREJQ9NTG1 2253 aa8.81□□□□□ -1
CDH3-203ENST00000542274 TRBV6-6A0A0A6YYG2 114 aa8.81□□□□□ -1
CDH3-203ENST00000542274 A8MZ25 164 aa8.81□□□□□ -1
CDH3-203ENST00000542274 C12orf77C9JDV5 145 aa8.81□□□□□ -1
CDH3-203ENST00000542274 KCNIP2Q9NS61 270 aa8.81□□□□□ -1
CDH3-203ENST00000542274 AP5S1Q9NUS5 200 aa8.81□□□□□ -1
CDH3-203ENST00000542274 TIMM8BQ9Y5J9 83 aaPredicted RBP8.81□□□□□ -1
CDH3-203ENST00000542274 TCRBV4S1A1TA0A5B7 111 aa8.81□□□□□ -1
CDH3-203ENST00000542274 J3QQQ9 107 aa8.81□□□□□ -1
CDH3-203ENST00000542274 LYRM7Q5U5X0 104 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms