RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 TMEM14CQ9P0S9 112 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 IGHV4-30-2A0A087WSY4 118 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 FAM162BQ5T6X4 162 aa13.44□□□□□ -0.26
SPIDR-227ENST00000541342 CNIH1O95406 144 aa13.43□□□□□ -0.26
SPIDR-227ENST00000541342 IGKV1-17P01599 117 aa13.43□□□□□ -0.26
SPIDR-227ENST00000541342 C5orf64Q2M2E5 130 aa13.43□□□□□ -0.26
SPIDR-227ENST00000541342 SAA4P35542 130 aa13.43□□□□□ -0.26
SPIDR-227ENST00000541342 EBI3Q14213 229 aa13.43□□□□□ -0.26
SPIDR-227ENST00000541342 CHEK1O14757 476 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 PIP4P2Q8N4L2 257 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 FAM208BQ5VWN6 2430 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 A1L4Q6 167 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 ARMS2P0C7Q2 107 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 CLEC2AQ6UVW9 174 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 NDUFS8O00217 210 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 RBX1P62877 108 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
SPIDR-227ENST00000541342 PAX8Q06710 450 aa13.41□□□□□ -0.26
SPIDR-227ENST00000541342 C21orf62-AS1Q17RA5 79 aa13.41□□□□□ -0.26
SPIDR-227ENST00000541342 ERASQ7Z444 233 aa13.41□□□□□ -0.26
SPIDR-227ENST00000541342 CENPVL3A0A0U1RRI6 287 aa13.41□□□□□ -0.26
SPIDR-227ENST00000541342 CRIP1P50238 77 aa13.41□□□□□ -0.26
SPIDR-227ENST00000541342 FOXE3Q13461 319 aa13.41□□□□□ -0.26
SPIDR-227ENST00000541342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.41□□□□□ -0.26
SPIDR-227ENST00000541342 NCBP2LA6PVI3 153 aaKnown RBP13.41□□□□□ -0.26
SPIDR-227ENST00000541342 SRSF8Q9BRL6 282 aaKnown RBP13.41□□□□□ -0.26
SPIDR-227ENST00000541342 TMEM11P17152 192 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 NDPQ00604 133 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 PMCHL2Q9BQD1 86 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 CENPEQ02224 2701 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 TRBV19A0A075B6N1 114 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 TRBV6-1A0A0K0K1D8 114 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 CSN3P07498 182 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 BVES-AS1Q5T3Y7 98 aa13.4□□□□□ -0.26
SPIDR-227ENST00000541342 TAX1BP3O14907 124 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 NPFFO15130 113 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 SIGLEC15Q6ZMC9 328 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 K7EP13 123 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 OR5AL1P0C617 328 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 RASL11BQ9BPW5 248 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 A0A1B0GUT8 65 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 H0Y8G0 127 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 K7EIM0 57 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 NUDT3O95989 172 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 SLC25A34Q6PIV7 304 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 PET117Q6UWS5 81 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 TMEM191AQ9H0A3 160 aa13.39□□□□□ -0.27
SPIDR-227ENST00000541342 LINC01545Q5VT33 79 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 ZNF562Q6V9R5 426 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 BCL6BQ8N143 479 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-227ENST00000541342 TMEM75Q8N9X5 138 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 GATD1Q8NB37 220 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 MAP1LC3CQ9BXW4 147 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 IGHV3OR16-10A0A075B7F0 116 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
SPIDR-227ENST00000541342 COX6B1P14854 86 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 SHANK2-AS3Q9BTD1 123 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 MUC21A0A0G2JKD1 596 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 MUC21A0A140T8X8 626 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 MUC21Q5SSG8 566 aa13.38□□□□□ -0.27
SPIDR-227ENST00000541342 NBPF19A0A087WUL8 3843 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 H3BRN7 92 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 NCR2O95944 276 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 FAM106CPP0CH98 169 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 PCP4P48539 62 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 FAM106AQ4KMX7 169 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 KLF17Q5JT82 389 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-227ENST00000541342 Q8N9W7 124 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 ARPC1AQ92747 370 aa13.37□□□□□ -0.27
SPIDR-227ENST00000541342 A0A096LNJ9 63 aa13.36□□□□□ -0.27
SPIDR-227ENST00000541342 ZNF747Q9BV97 191 aa13.36□□□□□ -0.27
SPIDR-227ENST00000541342 M0R3E3 92 aa13.36□□□□□ -0.27
SPIDR-227ENST00000541342 DEFB125Q8N687 156 aa13.36□□□□□ -0.27
SPIDR-227ENST00000541342 ZNF491Q8N8L2 437 aa13.36□□□□□ -0.27
SPIDR-227ENST00000541342 PSG8Q9UQ74 426 aa13.36□□□□□ -0.27
SPIDR-227ENST00000541342 EGR2P11161 476 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-227ENST00000541342 PSG3Q16557 428 aa13.35□□□□□ -0.27
SPIDR-227ENST00000541342 HSPB8Q9UJY1 196 aa13.35□□□□□ -0.27
SPIDR-227ENST00000541342 TIMM8BQ9Y5J9 83 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-227ENST00000541342 ANKRD17O75179 2603 aaKnown RBP13.35□□□□□ -0.27
SPIDR-227ENST00000541342 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
SPIDR-227ENST00000541342 HLA-DRB1P01911 266 aa13.35□□□□□ -0.27
SPIDR-227ENST00000541342 RHOGP84095 191 aa13.35□□□□□ -0.27
SPIDR-227ENST00000541342 LOXL1Q08397 574 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-227ENST00000541342 C8orf49Q96NF6 230 aa13.35□□□□□ -0.27
SPIDR-227ENST00000541342 AP5S1Q9NUS5 200 aa13.35□□□□□ -0.27
SPIDR-227ENST00000541342 A0A087X0K7 114 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 OR2T8A6NH00 312 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 C2orf91Q6ZV80 131 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 BPIFA4PQ86YQ2 179 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 POLQO75417 2590 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 BRD3OSQ6XYD6 125 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 ZNF414Q96IQ9 312 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 TRAV40A0A0B4J280 105 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 IGHV1-69DA0A0B4J2H0 117 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 IGHV1-69P01742 117 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 FANCD2OSQ96PS1 177 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 S4R3C0 116 aa13.34□□□□□ -0.27
SPIDR-227ENST00000541342 NPIPB5A8MRT5 1133 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms