RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 MYOZ3Q8TDC0 251 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 PRELID3AQ96N28 172 aa7.56□□□□□ -1.2
TTC39C-203ENST00000540918 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 C14orf144Q96I85 54 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 REC114Q7Z4M0 266 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 ARL6IP6Q8N6S5 226 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 A0A1W2PPR1 153 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 C7orf71A4D174 169 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 IGHV3-53P01767 116 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 DAZAP2Q15038 168 aaPredicted RBP7.55□□□□□ -1.2
TTC39C-203ENST00000540918 COX19Q49B96 90 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 C8orf49Q96NF6 230 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 JKAMPQ9P055 326 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 PEF1Q9UBV8 284 aaKnown RBP7.55□□□□□ -1.2
TTC39C-203ENST00000540918 ZZEF1O43149 2961 aa7.55□□□□□ -1.2
TTC39C-203ENST00000540918 TRAV12-2A0A075B6T6 113 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 IGLV1-47P01700 117 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 ASIPP42127 132 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 C10orf105Q8TEF2 133 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 F8P00451 2351 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 IGHV7-81A0A0B4J1V7 117 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 ZMAT5Q9UDW3 170 aaKnown RBP7.54□□□□□ -1.2
TTC39C-203ENST00000540918 MAST4O15021 2626 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 KNCNA6PVL3 124 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 DEFB131AP59861 70 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 DEFB113Q30KQ7 82 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 LYZL1Q6UWQ5 148 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 OR11H1Q8NG94 326 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 SLC25A2Q9BXI2 301 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 RPLP1P05386 114 aaKnown RBP7.54□□□□□ -1.2
TTC39C-203ENST00000540918 SHANK2-AS3Q9BTD1 123 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 MAP1LC3AQ9H492 121 aa7.54□□□□□ -1.2
TTC39C-203ENST00000540918 TEP1Q99973 2627 aaKnown RBP7.54□□□□□ -1.2
TTC39C-203ENST00000540918 STHQ8IWL8 128 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 WFDC11Q8NEX6 87 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 A0A087WWC5 75 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 IZUMO1RA6ND01 250 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 TOMM40O96008 361 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 ZNF843Q8N446 348 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 NCOR1P1Q9H4R4 102 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 CDC42EP3Q9UKI2 254 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 TRGV2A0A075B6R0 118 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 IFITM10A6NMD0 228 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 TSPOP30536 169 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 HINT1P49773 126 aaPredicted RBP7.53□□□□□ -1.2
TTC39C-203ENST00000540918 Q1RN00 199 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 SPINK13Q1W4C9 94 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 FBXL19-AS1Q494R0 122 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 TEX29Q8N6K0 151 aa7.53□□□□□ -1.2
TTC39C-203ENST00000540918 TRBV7-1A0A0A6YYK4 115 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 LOC105371267A0A1B0GV96 52 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 LMO4P61968 165 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 ZNF491Q8N8L2 437 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 NUP35Q8NFH5 326 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 OSTCQ9NRP0 149 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 TMEM160Q9NX00 188 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 A0A087WWL8 130 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 IGKV1-17P01599 117 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 SMIM6P0DI80 62 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 ZNF25P17030 456 aaPredicted RBP7.52□□□□□ -1.21
TTC39C-203ENST00000540918 DTX2Q86UW9 622 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 OR11H6Q8NGC7 330 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 FAM110DQ8TAY7 271 aaPredicted RBP7.52□□□□□ -1.21
TTC39C-203ENST00000540918 XCL2Q9UBD3 114 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 ERASQ7Z444 233 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 VGLL1Q99990 258 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 DAZ1Q9NQZ3 744 aaKnown RBP7.52□□□□□ -1.21
TTC39C-203ENST00000540918 PEMTQ9UBM1 199 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 HSPB8Q9UJY1 196 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
TTC39C-203ENST00000540918 SH2D1AO60880 128 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 CGB3P0DN86 165 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 CGB7P0DN87 165 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 KRTAP10-9P60411 292 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 SPATA45Q537H7 98 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 C14orf178Q8N769 122 aaPredicted RBP7.51□□□□□ -1.21
TTC39C-203ENST00000540918 KLK9Q9UKQ9 250 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 TMEM213A2RRL7 107 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 ARMS2P0C7Q2 107 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 PRR20EP86478 221 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 PRR20CP86479 221 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 PRR20DP86480 221 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 PRR20BP86481 221 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 PRR20AP86496 221 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 AMN1Q8IY45 258 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 Q8N9W7 124 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 SYT8Q8NBV8 401 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 TSKUQ8WUA8 353 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 TMEM170AQ8WVE7 144 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 LSM4Q9Y4Z0 139 aaKnown RBP7.51□□□□□ -1.21
TTC39C-203ENST00000540918 TRAV8-6A0A0B4J262 113 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 NUTF2P61970 127 aaKnown RBP7.51□□□□□ -1.21
TTC39C-203ENST00000540918 POU2AF1Q16633 256 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 PATE2Q6UY27 113 aa7.51□□□□□ -1.21
TTC39C-203ENST00000540918 ZFP30Q9Y2G7 519 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms