RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 OR2F1Q13607 317 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 PSG3Q16557 428 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 NMSQ5H8A3 153 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 PRSS48Q7RTY5 328 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 WFDC10BQ8IUB3 73 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 FAM219AQ8IW50 185 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 RNF182Q8N6D2 247 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 OR5H6Q8NGV6 325 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 ZNF486Q96H40 463 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-214ENST00000540865 TP53RKQ96S44 253 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-214ENST00000540865 CACFD1Q9UGQ2 172 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 PRO0255Q9UI72 69 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 RCL1Q9Y2P8 373 aaKnown RBP3.03□□□□□ -1.92
SNHG1-214ENST00000540865 PAM16Q9Y3D7 125 aa3.03□□□□□ -1.92
SNHG1-214ENST00000540865 TRGV1A0A0A0MS02 117 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 A0A0G2JRQ6 117 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 C3orf85A0A1B0GTC6 90 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 CEBPZOSA8MTT3 80 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 IBA57-AS1B1ANH7 110 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 GABARAPH6UMI1 98 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 B3GALNT1O75752 331 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 GABARAPO95166 117 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 GAS8-AS1O95177 125 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 IGLV2-11P01706 119 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 HLA-DMAP28067 261 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 HNRNPA3P51991 378 aaKnown RBP3.02□□□□□ -1.93
SNHG1-214ENST00000540865 CRYBA4P53673 196 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 ATP5IP56385 69 aaPredicted RBP3.02□□□□□ -1.93
SNHG1-214ENST00000540865 RPL37AP61513 92 aaKnown RBP3.02□□□□□ -1.93
SNHG1-214ENST00000540865 ZNF415Q09FC8 603 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 TRIM16LQ309B1 348 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 GFI1BQ5VTD9 330 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 GGNBP1Q5YKI7 109 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 ZNF680Q8NEM1 530 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 RNASE11Q8TAA1 199 aaKnown RBP3.02□□□□□ -1.93
SNHG1-214ENST00000540865 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 RBPMSQ93062 196 aaKnown RBP3.02□□□□□ -1.93
SNHG1-214ENST00000540865 ST6GAL2Q96JF0 529 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 SLC35E1Q96K37 410 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 TRGV9Q99603 122 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 PYGO2Q9BRQ0 406 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 SLC25A22Q9H936 323 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 TXNL4BQ9NX01 149 aaKnown RBP3.02□□□□□ -1.93
SNHG1-214ENST00000540865 HHLA3Q9XRX5 114 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 FUT9Q9Y231 359 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 TMEM56-RWDD3S4R434 201 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 U3KQ87 197 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 FSIP2Q5CZC0 6907 aa3.02□□□□□ -1.93
SNHG1-214ENST00000540865 A0A087X0K7 114 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 K7EQD1 137 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 SPINK4O60575 86 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 PRAF2O60831 178 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 NDUFB4O95168 129 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 PGAM2P15259 253 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 CXCL3P19876 107 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 SRIP30626 198 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 PRSS3P35030 304 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 RCVRNP35243 200 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 PIGPP57054 158 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 FGL1Q08830 312 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 LINC01556Q5JQF7 62 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 STEAP1BQ6NZ63 245 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 WDR73Q6P4I2 378 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 Q6ZRU5 148 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 ARRDC1Q8N5I2 433 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 THAP8Q8NA92 274 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 C11orf72Q8NBR9 251 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 TMEM37Q8WXS4 190 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 RPUSD4Q96CM3 377 aaKnown RBP3.01□□□□□ -1.93
SNHG1-214ENST00000540865 S100A16Q96FQ6 103 aaKnown RBP3.01□□□□□ -1.93
SNHG1-214ENST00000540865 TMEM147Q9BVK8 224 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 MRPL32Q9BYC8 188 aaKnown RBP3.01□□□□□ -1.93
SNHG1-214ENST00000540865 DNAJC4Q9NNZ3 241 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 GSN-AS1Q9NRJ2 163 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 CACNG5Q9UF02 275 aa3.01□□□□□ -1.93
SNHG1-214ENST00000540865 IGHV3-38A0A0C4DH36 116 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 CDS2O95674 445 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 IGHV3-53P01767 116 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 ORM1P02763 201 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 RPL7P18124 248 aaKnown RBP3□□□□□ -1.93
SNHG1-214ENST00000540865 ORM2P19652 201 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 SDC2P34741 201 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 MXD1Q05195 221 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 WFDC2Q14508 124 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 LAGE3Q14657 143 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 SP6Q3SY56 376 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 GPR107Q5VW38 600 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 IQCF2Q8IXL9 164 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 LGI3Q8N145 548 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 CCDC71LQ8N9Z2 235 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 ZBTB8BQ8NAP8 495 aaPredicted RBP3□□□□□ -1.93
SNHG1-214ENST00000540865 BPIFCQ8NFQ6 507 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 LRRC20Q8TCA0 184 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 DTD1Q8TEA8 209 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 GPX8Q8TED1 209 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 PCNPQ8WW12 178 aaKnown RBP3□□□□□ -1.93
SNHG1-214ENST00000540865 IL22RA2Q969J5 263 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 ODF3Q96PU9 254 aa3□□□□□ -1.93
SNHG1-214ENST00000540865 VGLL1Q99990 258 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms