RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, human

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB35-204	ENST00000540803	FAM222A	Q5U5X8	452 aa		13.67	□□□□□ -0.22
RAB35-204	ENST00000540803	TMEM14C	Q9P0S9	112 aa		13.67	□□□□□ -0.22
RAB35-204	ENST00000540803	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.67	□□□□□ -0.22
RAB35-204	ENST00000540803	ALG5	Q9Y673	324 aa		13.67	□□□□□ -0.22
RAB35-204	ENST00000540803	ZNF253	O75346	499 aa		13.66	□□□□□ -0.22
RAB35-204	ENST00000540803	PET100	P0DJ07	73 aa		13.66	□□□□□ -0.22
RAB35-204	ENST00000540803	PPP1R14D	Q9NXH3	145 aa		13.66	□□□□□ -0.22
RAB35-204	ENST00000540803	MBD2	Q9UBB5	411 aa		13.66	□□□□□ -0.22
RAB35-204	ENST00000540803	HSPB11	Q9Y547	144 aa		13.66	□□□□□ -0.22
RAB35-204	ENST00000540803	TRBV19	A0A075B6N1	114 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	TEX48	A0A1B0GUV7	120 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	PTTG1	O95997	202 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	PYY	P10082	97 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	CDKN1B	P46527	198 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	RPP25L	Q8N5L8	163 aa	Known RBP	13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	ATP5S	Q99766	215 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	NIPSNAP3B	Q9BS92	247 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	SLC25A2	Q9BXI2	301 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	PLA2G2E	Q9NZK7	142 aa		13.65	□□□□□ -0.22
RAB35-204	ENST00000540803	BIRC6	Q9NR09	4857 aa		13.64	□□□□□ -0.23
RAB35-204	ENST00000540803	HIST1H1E	P10412	219 aa	Known RBP	13.64	□□□□□ -0.23
RAB35-204	ENST00000540803	MIR17HG	Q75NE6	70 aa		13.64	□□□□□ -0.23
RAB35-204	ENST00000540803	OR10J6P	Q8NGY7	276 aa		13.64	□□□□□ -0.23
RAB35-204	ENST00000540803	FAM167A-AS1	Q96KT0	104 aa		13.64	□□□□□ -0.23
RAB35-204	ENST00000540803	KCNIP2	Q9NS61	270 aa		13.64	□□□□□ -0.23
RAB35-204	ENST00000540803	NDUFB4	O95168	129 aa		13.63	□□□□□ -0.23
RAB35-204	ENST00000540803	RPL12	P30050	165 aa	Known RBP	13.63	□□□□□ -0.23
RAB35-204	ENST00000540803	KIR3DS1	Q14943	382 aa		13.63	□□□□□ -0.23
RAB35-204	ENST00000540803	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB35-204	ENST00000540803		M0R3E3	92 aa		13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	AZU1	P20160	251 aa		13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	PDE6H	Q13956	83 aa		13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	OXA1L	Q15070	435 aa		13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	TMEM256	Q8N2U0	113 aa		13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	MRPL53	Q96EL3	112 aa	Known RBP	13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	LINC01587	Q99440	93 aa		13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	SMIM3	Q9BZL3	60 aa		13.62	□□□□□ -0.23
RAB35-204	ENST00000540803	PLAC8L1	A1L4L8	177 aa		13.61	□□□□□ -0.23
RAB35-204	ENST00000540803	NPIPB6	E9PJ23	425 aa		13.61	□□□□□ -0.23
RAB35-204	ENST00000540803	C17orf112	F2Z3M2	114 aa		13.61	□□□□□ -0.23
RAB35-204	ENST00000540803	TSPO	P30536	169 aa		13.61	□□□□□ -0.23
RAB35-204	ENST00000540803	BLNK	Q8WV28	456 aa		13.61	□□□□□ -0.23
RAB35-204	ENST00000540803	MRPL32	Q9BYC8	188 aa	Known RBP	13.61	□□□□□ -0.23
RAB35-204	ENST00000540803	TIMM9	Q9Y5J7	89 aa		13.61	□□□□□ -0.23
RAB35-204	ENST00000540803	CT45A10	P0DMU9	189 aa		13.6	□□□□□ -0.23
RAB35-204	ENST00000540803	TAS2R60	P59551	318 aa		13.6	□□□□□ -0.23
RAB35-204	ENST00000540803	EXOC3-AS1	Q8N2X6	119 aa		13.6	□□□□□ -0.23
RAB35-204	ENST00000540803	ODF3	Q96PU9	254 aa		13.6	□□□□□ -0.23
RAB35-204	ENST00000540803	WFDC1	Q9HC57	220 aa		13.6	□□□□□ -0.23
RAB35-204	ENST00000540803	FCN2	Q15485	313 aa		13.59	□□□□□ -0.23
RAB35-204	ENST00000540803	GFI1B	Q5VTD9	330 aa		13.59	□□□□□ -0.23
RAB35-204	ENST00000540803	C20orf144	Q9BQM9	153 aa		13.59	□□□□□ -0.23
RAB35-204	ENST00000540803	NDUFAF3	Q9BU61	184 aa		13.59	□□□□□ -0.23
RAB35-204	ENST00000540803	OR51M1	Q9H341	326 aa		13.59	□□□□□ -0.23
RAB35-204	ENST00000540803	FUT9	Q9Y231	359 aa		13.59	□□□□□ -0.23
RAB35-204	ENST00000540803	PRELID1	Q9Y255	219 aa		13.59	□□□□□ -0.23
RAB35-204	ENST00000540803	DNAH2	Q9P225	4427 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	LYRM9	A8MSI8	78 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	IFNA5	P01569	189 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	HTN1	P15515	57 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	DAD1	P61803	113 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	FFAR4	Q5NUL3	377 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	SCGB1C1	Q8TD33	95 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	FXYD5	Q96DB9	178 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803	PAXX	Q9BUH6	204 aa		13.58	□□□□□ -0.24
RAB35-204	ENST00000540803		H7BYZ3	331 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	NBEAP1	P0C6P0	100 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	HTN3	P15516	51 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	LEP	P41159	167 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	ERCC8	Q13216	396 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	ZNF503	Q96F45	646 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	C16orf74	Q96GX8	76 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	MED28	Q9H204	178 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803	AAMDC	Q9H7C9	122 aa		13.57	□□□□□ -0.24
RAB35-204	ENST00000540803		J3KRW8	73 aa		13.56	□□□□□ -0.24
RAB35-204	ENST00000540803	OR10J4	P0C629	311 aa		13.56	□□□□□ -0.24
RAB35-204	ENST00000540803	ICAM4	Q14773	271 aa		13.56	□□□□□ -0.24
RAB35-204	ENST00000540803	RNASE8	Q8TDE3	154 aa	Known RBP	13.56	□□□□□ -0.24
RAB35-204	ENST00000540803	RNF141	Q8WVD5	230 aa		13.56	□□□□□ -0.24
RAB35-204	ENST00000540803	FAM210B	Q96KR6	192 aa		13.56	□□□□□ -0.24
RAB35-204	ENST00000540803	TMEM263	Q8WUH6	116 aa	Known RBP	13.55	□□□□□ -0.24
RAB35-204	ENST00000540803	PHYHIPL	Q96FC7	376 aa		13.55	□□□□□ -0.24
RAB35-204	ENST00000540803	FAM19A4	Q96LR4	140 aa		13.55	□□□□□ -0.24
RAB35-204	ENST00000540803	AGPAT4-IT1	Q9H0P7	198 aa		13.55	□□□□□ -0.24
RAB35-204	ENST00000540803	TRAV12-3	A0A0B4J271	114 aa		13.54	□□□□□ -0.24
RAB35-204	ENST00000540803	OR7C2	O60412	319 aa		13.54	□□□□□ -0.24
RAB35-204	ENST00000540803	DEFB130B	P0DP73	79 aa		13.54	□□□□□ -0.24
RAB35-204	ENST00000540803	DEFB130A	P0DP74	79 aa		13.54	□□□□□ -0.24
RAB35-204	ENST00000540803	FAM122C	Q6P4D5	195 aa		13.54	□□□□□ -0.24
RAB35-204	ENST00000540803	ZNF493	Q6ZR52	646 aa		13.54	□□□□□ -0.24
RAB35-204	ENST00000540803	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB35-204	ENST00000540803	IGKV2D-40	P01614	121 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB35-204	ENST00000540803	C9orf47	Q6ZRZ4	202 aa		13.53	□□□□□ -0.24
RAB35-204	ENST00000540803	LINC00477	Q96M19	166 aa		13.53	□□□□□ -0.24
RAB35-204	ENST00000540803	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB35-204	ENST00000540803	KLLN	B2CW77	178 aa		13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	EIF3G	O75821	320 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
RAB35-204	ENST00000540803	SLC25A5	P05141	298 aa	Known RBP	13.52	□□□□□ -0.25
RAB35-204	ENST00000540803		P0DMU3	169 aa		13.52	□□□□□ -0.25

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