RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 Q6ZWC4 215 aa11.39□□□□□ -0.59
DDB1-218ENST00000540784 CTXND1A0A1B0GTU2 59 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 ZNF705DP0CH99 300 aaPredicted RBP11.38□□□□□ -0.59
DDB1-218ENST00000540784 ZNF705BP0CI00 300 aaPredicted RBP11.38□□□□□ -0.59
DDB1-218ENST00000540784 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 ICAM4Q14773 271 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 EXOC3-AS1Q8N2X6 119 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 TMED6Q8WW62 240 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 CLUHP3Q96NS8 147 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
DDB1-218ENST00000540784 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
DDB1-218ENST00000540784 GCHFRP30047 84 aa11.37□□□□□ -0.59
DDB1-218ENST00000540784 ZNF726P1Q15940 193 aa11.37□□□□□ -0.59
DDB1-218ENST00000540784 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
DDB1-218ENST00000540784 MRPL53Q96EL3 112 aaKnown RBP11.37□□□□□ -0.59
DDB1-218ENST00000540784 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 SPRY2O43597 315 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
DDB1-218ENST00000540784 CNN1P51911 297 aaKnown RBP11.36□□□□□ -0.59
DDB1-218ENST00000540784 NKX2-5P52952 324 aaPredicted RBP11.36□□□□□ -0.59
DDB1-218ENST00000540784 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
DDB1-218ENST00000540784 SSX7Q7RTT5 188 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 PHYHIPLQ96FC7 376 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 RCHY1Q96PM5 261 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 Q9H3A6 140 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 PPP1R14DQ9NXH3 145 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 U3KQK5 164 aa11.36□□□□□ -0.59
DDB1-218ENST00000540784 PGPA6NDG6 321 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 M0R3E3 92 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 CSN1S1P47710 185 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 FHITP49789 147 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 FAM74A1Q5RGS3 127 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 DPPA3Q6W0C5 159 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 FAM213BQ8TBF2 198 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 SUN5Q8TC36 379 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 RNF183Q96D59 192 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 C1QTNF4Q9BXJ3 329 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 RETNQ9HD89 108 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 TP53TG1Q9Y2A0 90 aa11.35□□□□□ -0.59
DDB1-218ENST00000540784 MAP1LC3B2A6NCE7 125 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
DDB1-218ENST00000540784 RAB5CP51148 216 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 FGF8P55075 233 aaPredicted RBP11.34□□□□□ -0.59
DDB1-218ENST00000540784 FXYD7P58549 80 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 RXFP4Q8TDU9 374 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 OVOL2Q9BRP0 275 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 MAP1LC3BQ9GZQ8 125 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 XCL2Q9UBD3 114 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 DNAH9Q9NYC9 4486 aa11.34□□□□□ -0.59
DDB1-218ENST00000540784 A8MTW9 85 aa11.33□□□□□ -0.6
DDB1-218ENST00000540784 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
DDB1-218ENST00000540784 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
DDB1-218ENST00000540784 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
DDB1-218ENST00000540784 SLC35B3Q9H1N7 401 aa11.33□□□□□ -0.6
DDB1-218ENST00000540784 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
DDB1-218ENST00000540784 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
DDB1-218ENST00000540784 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
DDB1-218ENST00000540784 TMPRSS5Q9H3S3 457 aa11.32□□□□□ -0.6
DDB1-218ENST00000540784 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
DDB1-218ENST00000540784 AGRNO00468 2067 aa11.32□□□□□ -0.6
DDB1-218ENST00000540784 AMBPP02760 352 aa11.31□□□□□ -0.6
DDB1-218ENST00000540784 SULT1A2P50226 295 aa11.31□□□□□ -0.6
DDB1-218ENST00000540784 RARRES2Q99969 163 aa11.31□□□□□ -0.6
DDB1-218ENST00000540784 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 NPIPB6E9PJ23 425 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 TSPOP30536 169 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 SUMO1P63165 101 aaKnown RBP11.3□□□□□ -0.6
DDB1-218ENST00000540784 ERCC8Q13216 396 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 SPINK13Q1W4C9 94 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 OR11H2Q8NH07 326 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 AGPAT4-IT1Q9H0P7 198 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
DDB1-218ENST00000540784 IGKV2-40A0A087WW87 121 aaPredicted RBP11.29□□□□□ -0.6
DDB1-218ENST00000540784 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 BOLA2-SMG1P6H3BVE0 249 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 IGKV2D-40P01614 121 aaPredicted RBP11.29□□□□□ -0.6
DDB1-218ENST00000540784 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
DDB1-218ENST00000540784 CT45A10P0DMU9 189 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 UBE2G2P60604 165 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 TMEM78Q5T7P6 136 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 C9orf47Q6ZRZ4 202 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 VGLL1Q99990 258 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 TGP01266 2768 aa11.29□□□□□ -0.6
DDB1-218ENST00000540784 A0A1B0GV50 99 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 TEX46H3BTG2 121 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 M0R2Z0 102 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 LEPP41159 167 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 ODF3Q96PU9 254 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
DDB1-218ENST00000540784 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms