RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 SNURFLB1AK76 121 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 FNDC10F2Z333 226 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 COX7A2P2O60397 106 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 NDUFB6O95139 128 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 OR4E1P0C645 316 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 IGLC2P0DOY2 106 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 BAK1Q16611 211 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 IAH1Q2TAA2 248 aaPredicted RBP9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 ZNF546Q86UE3 836 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 SAT2Q96F10 170 aaPredicted RBP9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 ZNF503Q96F45 646 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 C20orf144Q9BQM9 153 aa9.8□□□□□ -0.84
SEMA4D-222ENST00000540183 A0A096LPF7 62 aa9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 TSC22D2O75157 780 aa9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 LINC00315P59091 139 aa9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 BPIFA4PQ86YQ2 179 aa9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 ZNF431Q8TF32 576 aaPredicted RBP9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 DEDD2Q8WXF8 326 aa9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 SRRQ9GZT4 340 aa9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 GSKIPQ9P0R6 139 aa9.79□□□□□ -0.84
SEMA4D-222ENST00000540183 C7orf66A4D0T2 115 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 NPIPB6E9PJ23 425 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 CCSO14618 274 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 MBPP02686 304 aaPredicted RBP9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 BTF3P20290 206 aaKnown RBP9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 BTCP35070 178 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 LEPP41159 167 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 ERCC8Q13216 396 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 C4orf46Q504U0 113 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 PXDC1Q5TGL8 231 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 C10orf113Q5VZT2 155 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 Q6ZRN7 208 aaPredicted RBP9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 S100A7AQ86SG5 101 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 GSN-AS1Q9NRJ2 163 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 TNFRSF18Q9Y5U5 241 aa9.78□□□□□ -0.84
SEMA4D-222ENST00000540183 A0A1W2PPQ1 181 aa9.77□□□□□ -0.85
SEMA4D-222ENST00000540183 S100A5P33763 92 aa9.77□□□□□ -0.85
SEMA4D-222ENST00000540183 TAS2R30P59541 319 aa9.77□□□□□ -0.85
SEMA4D-222ENST00000540183 MIC13Q5XKP0 118 aa9.77□□□□□ -0.85
SEMA4D-222ENST00000540183 C11orf72Q8NBR9 251 aa9.77□□□□□ -0.85
SEMA4D-222ENST00000540183 PXMP4Q9Y6I8 212 aa9.77□□□□□ -0.85
SEMA4D-222ENST00000540183 H3BNG1 76 aa9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 M0R3E3 92 aa9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 CD300CQ08708 224 aa9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 BTN1A1Q13410 526 aa9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 SDHCQ99643 169 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 RNF24Q9Y225 148 aa9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 VPS13BQ7Z7G8 4022 aa9.76□□□□□ -0.85
SEMA4D-222ENST00000540183 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 CCDC160A6NGH7 325 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 CST7O76096 145 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 CAMLGP49069 296 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 INPP1P49441 399 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 Q6ZQT7 251 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 NRARPQ7Z6K4 114 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 DNAJC4Q9NNZ3 241 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
SEMA4D-222ENST00000540183 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 C7orf71A4D174 169 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 ZNF324O75467 553 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 IGHV3-53P01767 116 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 TRIQKQ629K1 86 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 MITD1Q8WV92 249 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 GGACTQ9BVM4 153 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 TP53TG3Q9ULZ0 132 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 FUT9Q9Y231 359 aa9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 LSM5Q9Y4Y9 91 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-222ENST00000540183 FAM24AA6NFZ4 105 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 L7N2F9 121 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 SIVA1O15304 175 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 NDUFB4O95168 129 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 RNASE4P34096 147 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 BCAP31P51572 246 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 VAMP2P63027 116 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 SPANXN2Q5MJ10 180 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 PRR9Q5T870 116 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 AGPAT4-IT1Q9H0P7 198 aa9.73□□□□□ -0.85
SEMA4D-222ENST00000540183 KLLNB2CW77 178 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 NXPH4O95158 308 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 SLC25A5P05141 298 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 DNAH10OSP0CZ25 163 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 PYYP10082 97 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 XGP55808 180 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 GUK1Q16774 197 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 Q6ZRG5 221 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 RBM38Q9H0Z9 239 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 C11orf1Q9H5F2 150 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 WDR83OSQ9Y284 106 aa9.72□□□□□ -0.85
SEMA4D-222ENST00000540183 MYCBP2O75592 4640 aa9.71□□□□□ -0.85
SEMA4D-222ENST00000540183 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.85
SEMA4D-222ENST00000540183 TRBV19A0A075B6N1 114 aa9.71□□□□□ -0.86
SEMA4D-222ENST00000540183 UBE2L5PA0A1B0GUS4 154 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms