RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 IGLV3-9A0A075B6K5 115 aa10.32□□□□□ -0.76
MSH6-210ENST00000540021 H3BVH4 76 aa10.32□□□□□ -0.76
MSH6-210ENST00000540021 HAX1O00165 279 aa10.32□□□□□ -0.76
MSH6-210ENST00000540021 TGFAP01135 160 aa10.32□□□□□ -0.76
MSH6-210ENST00000540021 GATA4P43694 442 aa10.32□□□□□ -0.76
MSH6-210ENST00000540021 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
MSH6-210ENST00000540021 COL6A3P12111 3177 aa10.32□□□□□ -0.76
MSH6-210ENST00000540021 F5H697 171 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 GP9P14770 177 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 FAM169BQ8N8A8 192 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 OR4X2Q8NGF9 303 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 TRBV19A0A075B6N1 114 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 A0A1B0GXF2 115 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 KLRD1Q13241 179 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 TMEM78Q5T7P6 136 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 ZC2HC1BQ5TFG8 222 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 C22orf34Q6ZV56 151 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 NEU4Q8WWR8 484 aaPredicted RBP10.31□□□□□ -0.76
MSH6-210ENST00000540021 A0A1B0GW15 77 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 M0R381 172 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 IGLC1P0CG04 106 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 FAM215AQ9Y5M1 114 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 ARHGAP32A7KAX9 2087 aa10.31□□□□□ -0.76
MSH6-210ENST00000540021 CEP295Q9C0D2 2601 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 NPYP01303 97 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 LOXP28300 417 aaPredicted RBP10.3□□□□□ -0.76
MSH6-210ENST00000540021 FAM71F2Q6NXP2 309 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 C9orf118A6NHY6 69 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 MRPL51Q4U2R6 128 aaKnown RBP10.3□□□□□ -0.76
MSH6-210ENST00000540021 RUSC1-AS1Q66K80 236 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
MSH6-210ENST00000540021 CTSZQ9UBR2 303 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 SEM1Q6ZVN7 128 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 OR9G4Q8NGQ1 327 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 C1RLQ9NZP8 487 aa10.3□□□□□ -0.76
MSH6-210ENST00000540021 OTOGLQ3ZCN5 2332 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 PAX2Q02962 417 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 ERCC8Q13216 396 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 CR1LQ2VPA4 569 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 NBR2O15453 112 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 HLA-DMBP28068 263 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 URB1-AS1Q96HZ7 61 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 A0A1B0GWB2 263 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 SHANK2-AS3Q9BTD1 123 aa10.29□□□□□ -0.76
MSH6-210ENST00000540021 H7C2G1 150 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 IGKCP01834 107 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 RPS20P60866 119 aaKnown RBP10.28□□□□□ -0.76
MSH6-210ENST00000540021 TTC9CQ8N5M4 171 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 ADAMTS20P59510 1910 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 BUB1B-PAK6H3BSN5 160 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 LINC01545Q5VT33 79 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 PVRIGQ6DKI7 326 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 FAM57AQ8TBR7 257 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 ZNF418Q8TF45 676 aaPredicted RBP10.28□□□□□ -0.76
MSH6-210ENST00000540021 MSRB1Q9NZV6 116 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 DOPEY2Q9Y3R5 2298 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 FABP5P3A8MUU1 101 aa10.28□□□□□ -0.76
MSH6-210ENST00000540021 OR11H12B2RN74 326 aa10.27□□□□□ -0.76
MSH6-210ENST00000540021 H3BRM9 83 aa10.27□□□□□ -0.76
MSH6-210ENST00000540021 PRSS33Q8NF86 280 aa10.27□□□□□ -0.76
MSH6-210ENST00000540021 OR11H1Q8NG94 326 aa10.27□□□□□ -0.76
MSH6-210ENST00000540021 OR11H2Q8NH07 326 aa10.27□□□□□ -0.76
MSH6-210ENST00000540021 A0A0G2JNJ9 132 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 GATA1P15976 413 aaPredicted RBP10.27□□□□□ -0.77
MSH6-210ENST00000540021 Q1RN00 199 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 TMEM155Q4W5P6 130 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 ARPC1AQ92747 370 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 ZNF479Q96JC4 524 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 Q9UFV3 132 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 TRAV40A0A0B4J280 105 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 C19orf71A6NCJ1 209 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 C19orf67A6NJJ6 358 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 DPM2O94777 84 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 APOMO95445 188 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 C16orf92Q96LL3 132 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 CHAC1Q9BUX1 264 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 NCOR1P1Q9H4R4 102 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 KLF12Q9Y4X4 402 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 TEX36Q5VZQ5 186 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
MSH6-210ENST00000540021 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.26□□□□□ -0.77
MSH6-210ENST00000540021 IGKV1-17P01599 117 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 MLST8Q9BVC4 326 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 ATRXP46100 2492 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 K7EP34 96 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 CIDEAO60543 219 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 IGLV2-23P01705 113 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 ADAMTSL5Q6ZMM2 481 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 ABHD17AQ96GS6 310 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 MRPL16Q9NX20 251 aaKnown RBP10.26□□□□□ -0.77
MSH6-210ENST00000540021 TRAV26-2A0A0B4J265 109 aa10.26□□□□□ -0.77
MSH6-210ENST00000540021 PSMB11A5LHX3 300 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms