RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PQLC2Q6ZP29 291 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 FOXI2Q6ZQN5 318 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 BAP18Q8IXM2 172 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 KIR2DL5AQ8N109 375 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 OR11H4Q8NGC9 324 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 OR4B1Q8NGF8 309 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 OR10J6PQ8NGY7 276 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 KIR2DL5BQ8NHK3 375 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 CMTM2Q8TAZ6 248 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 C1QTNF4Q9BXJ3 329 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 PRELID1Q9Y255 219 aa4.81□□□□□ -1.64
SNHG1-212ENST00000539975 TRBV19A0A075B6N1 114 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 ZNF253O75346 499 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 CXorf1O96002 111 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 OR10J4P0C629 311 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 RPL35AP18077 110 aaKnown RBP4.8□□□□□ -1.64
SNHG1-212ENST00000539975 RAB5CP51148 216 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 PSG3Q16557 428 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 MIR17HGQ75NE6 70 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 SLC51BQ86UW2 128 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 LYPD1Q8N2G4 141 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 RXFP4Q8TDU9 374 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 RAB24Q969Q5 203 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 CSTL1Q9H114 145 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 SH3BGRL3Q9H299 93 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 TMEM167BQ9NRX6 74 aa4.8□□□□□ -1.64
SNHG1-212ENST00000539975 CTXND1A0A1B0GTU2 59 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 A0A1B0GVG6 124 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 KNCNA6PVL3 124 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 G3V3Q6 166 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 H3BTX0 84 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 K7EQM0 130 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 HMGB3O15347 200 aaKnown RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 CA1P00915 261 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 IGKV3-20P01619 116 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 SNRPCP09234 159 aaKnown RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 IGLC2P0DOY2 106 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 PYYP10082 97 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 TSPOP30536 169 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 RANP62826 216 aaKnown RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 HAGHQ16775 308 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 LGALSLQ3ZCW2 172 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 DPPA3Q6W0C5 159 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 RNF182Q8N6D2 247 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 RPUSD4Q96CM3 377 aaKnown RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 ASCL2Q99929 193 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 SLC25A2Q9BXI2 301 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 WFDC10AQ9H1F0 79 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 SAV1Q9H4B6 383 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 ZNF331Q9NQX6 463 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-212ENST00000539975 MGAM2Q2M2H8 2515 aa4.79□□□□□ -1.64
SNHG1-212ENST00000539975 RBMY1BA6NDE4 496 aaKnown RBP4.78□□□□□ -1.64
SNHG1-212ENST00000539975 RBMY1EA6NEQ0 496 aaKnown RBP4.78□□□□□ -1.64
SNHG1-212ENST00000539975 H3BQ15 152 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 AMBPP02760 352 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 RBMY1DP0C7P1 496 aaKnown RBP4.78□□□□□ -1.64
SNHG1-212ENST00000539975 ARL14EPLP0DKL9 152 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 HLA-DRB4P13762 266 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 PPT1P50897 306 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 HIST1H1AQ02539 215 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-212ENST00000539975 TMEM78Q5T7P6 136 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 IGFL4Q6B9Z1 124 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 Q6ZWC4 215 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 SBSPONQ8IVN8 264 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 RPP25LQ8N5L8 163 aaKnown RBP4.78□□□□□ -1.64
SNHG1-212ENST00000539975 FAM24BQ8N5W8 94 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 CLRN3Q8NCR9 226 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 FAM213BQ8TBF2 198 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 SFT2D1Q8WV19 159 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 TMED6Q8WW62 240 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 MRPL53Q96EL3 112 aaKnown RBP4.78□□□□□ -1.64
SNHG1-212ENST00000539975 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 RCHY1Q96PM5 261 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 TMEM208Q9BTX3 173 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 CYTL1Q9NRR1 136 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 ZNF586Q9NXT0 402 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 HLA-DRB4X5D2U9 266 aa4.78□□□□□ -1.64
SNHG1-212ENST00000539975 A0A0J9YX75 114 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 MAP1LC3B2A6NCE7 125 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 PGPA6NDG6 321 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 F6UZH7 168 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 H3BMM0 161 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 SOCS3O14543 225 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 MRPS12O15235 138 aaKnown RBP4.77□□□□□ -1.65
SNHG1-212ENST00000539975 SPRY2O43597 315 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 IFNA7P01567 189 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 STAG3L2P0CL84 134 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 STAG3L3P0CL85 134 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 GCHFRP30047 84 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 TRPT1Q86TN4 253 aaKnown RBP4.77□□□□□ -1.65
SNHG1-212ENST00000539975 OR8A1Q8NGG7 326 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 FXYD5Q96DB9 178 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 SAT2Q96F10 170 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-212ENST00000539975 ZNF503Q96F45 646 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 PHYHIPLQ96FC7 376 aa4.77□□□□□ -1.65
SNHG1-212ENST00000539975 FAM167A-AS1Q96KT0 104 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms