RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ARL16Q0P5N6 197 aa10.74□□□□□ -0.69
UBE3B-211ENST00000539843 TTC32Q5I0X7 151 aa10.74□□□□□ -0.69
UBE3B-211ENST00000539843 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
UBE3B-211ENST00000539843 RNF141Q8WVD5 230 aa10.74□□□□□ -0.69
UBE3B-211ENST00000539843 TMEM37Q8WXS4 190 aa10.74□□□□□ -0.69
UBE3B-211ENST00000539843 C2orf50Q96LR7 162 aa10.74□□□□□ -0.69
UBE3B-211ENST00000539843 ODF3Q96PU9 254 aa10.74□□□□□ -0.69
UBE3B-211ENST00000539843 SDHCQ99643 169 aaPredicted RBP10.74□□□□□ -0.69
UBE3B-211ENST00000539843 UBE2L5PA0A1B0GUS4 154 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 H3BTX0 84 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 J3KRW8 73 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 ZNF253O75346 499 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 IGLC2P0DOY2 106 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 SULT1A1P50225 295 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 MIC13Q5XKP0 118 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 SSX7Q7RTT5 188 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 ZNF503Q96F45 646 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 NUDT15Q9NV35 164 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 NDUFA13Q9P0J0 144 aa10.73□□□□□ -0.69
UBE3B-211ENST00000539843 SLC17A3O00476 420 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 PRB4P10163 310 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-211ENST00000539843 RPL29P47914 159 aaKnown RBP10.72□□□□□ -0.69
UBE3B-211ENST00000539843 ATP6V1FQ16864 119 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 ZNF680Q8NEM1 530 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 MRPL53Q96EL3 112 aaKnown RBP10.72□□□□□ -0.69
UBE3B-211ENST00000539843 AAMDCQ9H7C9 122 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 LYRM2Q9NU23 88 aaPredicted RBP10.72□□□□□ -0.69
UBE3B-211ENST00000539843 SLC39A9Q9NUM3 307 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 PRELID1Q9Y255 219 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 WDR83OSQ9Y284 106 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 TIMM9Q9Y5J7 89 aa10.72□□□□□ -0.69
UBE3B-211ENST00000539843 TRAV26-1A0A087WT03 109 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 GAGE12BA1L429 117 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 FAM24AA6NFZ4 105 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 MPDU1O75352 247 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 GAGE7O76087 117 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 SLC25A5P05141 298 aaKnown RBP10.71□□□□□ -0.69
UBE3B-211ENST00000539843 GAGE12FP0CL80 117 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 GAGE12GP0CL81 117 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 GAGE12IP0CL82 117 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 MZT2BQ6NZ67 158 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 RXFP4Q8TDU9 374 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 CCDC32Q9BV29 185 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 LINC00588Q9Y4M8 146 aa10.71□□□□□ -0.69
UBE3B-211ENST00000539843 TRAV12-3A0A0B4J271 114 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 FAM240BA0A1B0GVZ2 78 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 C16orf90A8MZG2 172 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 PRAC2D3DTV9 90 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 NPIPB6E9PJ23 425 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 H3BQ15 152 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 H2AFB2P0C5Z0 115 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 FGF7P21781 194 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 PDE6HQ13956 83 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 ZNF575Q86XF7 245 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 SAT2Q96F10 170 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-211ENST00000539843 SEC22CQ9BRL7 303 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 PARD6GQ9BYG4 376 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-211ENST00000539843 GPN1Q9HCN4 374 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-211ENST00000539843 FAT2Q9NYQ8 4349 aa10.7□□□□□ -0.7
UBE3B-211ENST00000539843 TRGV2A0A075B6R0 118 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 PLA2G10O15496 165 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 HIST1H1EP10412 219 aaKnown RBP10.69□□□□□ -0.7
UBE3B-211ENST00000539843 VWC2Q2TAL6 325 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 MORN5Q5VZ52 161 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 LINC00477Q96M19 166 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 Q9H8V8 135 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 KCNIP2Q9NS61 270 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 TMEM14CQ9P0S9 112 aa10.69□□□□□ -0.7
UBE3B-211ENST00000539843 DNAH2Q9P225 4427 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 TRBV19A0A075B6N1 114 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 A0A0J9YY99 117 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 H3BNG1 76 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 CT45A10P0DMU9 189 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 DAZ2Q13117 558 aaKnown RBP10.68□□□□□ -0.7
UBE3B-211ENST00000539843 RAB32Q13637 225 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 TMEM252Q8N6L7 170 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 LINC00612Q8N6U2 182 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 CHAC2Q8WUX2 184 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 SLC25A31Q9H0C2 315 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 ZNF586Q9NXT0 402 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 DNAH17Q9UFH2 4485 aa10.68□□□□□ -0.7
UBE3B-211ENST00000539843 KIAA1109Q2LD37 5005 aa10.67□□□□□ -0.7
UBE3B-211ENST00000539843 C7orf71A4D174 169 aa10.67□□□□□ -0.7
UBE3B-211ENST00000539843 TNP2Q05952 138 aa10.67□□□□□ -0.7
UBE3B-211ENST00000539843 KIR3DS1Q14943 382 aa10.67□□□□□ -0.7
UBE3B-211ENST00000539843 TMEM78Q5T7P6 136 aa10.67□□□□□ -0.7
UBE3B-211ENST00000539843 A0A1W2PPQ1 181 aa10.66□□□□□ -0.7
UBE3B-211ENST00000539843 IGSF23A1L1A6 192 aa10.66□□□□□ -0.7
UBE3B-211ENST00000539843 GPX1P07203 203 aa10.66□□□□□ -0.7
UBE3B-211ENST00000539843 BTF3P20290 206 aaKnown RBP10.66□□□□□ -0.7
UBE3B-211ENST00000539843 EIF4E3Q8N5X7 224 aaKnown RBP10.66□□□□□ -0.7
UBE3B-211ENST00000539843 BLNKQ8WV28 456 aa10.66□□□□□ -0.7
UBE3B-211ENST00000539843 UPK3BQ9BT76 320 aa10.66□□□□□ -0.7
UBE3B-211ENST00000539843 DNAH11Q96DT5 4516 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 TRGV1A0A0A0MS02 117 aa10.65□□□□□ -0.7
UBE3B-211ENST00000539843 M0R3E3 92 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms