RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 X6R8D5 127 aa10.74□□□□□ -0.69
USB1-203ENST00000539737 BORCS7-ASMTA0A0B4J1R7 106 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 ARPC5O15511 151 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 DUSP14O95147 198 aaKnown RBP10.73□□□□□ -0.69
USB1-203ENST00000539737 RHOBP62745 196 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 PDE6HQ13956 83 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 PSG3Q16557 428 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 ACOT6Q3I5F7 207 aaPredicted RBP10.73□□□□□ -0.69
USB1-203ENST00000539737 GDF5OSQ5U4N7 250 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 MIR17HGQ75NE6 70 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 PSMG3Q9BT73 122 aaPredicted RBP10.73□□□□□ -0.69
USB1-203ENST00000539737 SLC25A2Q9BXI2 301 aa10.73□□□□□ -0.69
USB1-203ENST00000539737 ZNF705EA8MWA4 302 aaPredicted RBP10.72□□□□□ -0.69
USB1-203ENST00000539737 F6UB75 175 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 H3BQ15 152 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 SLC17A3O00476 420 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 HIST1H1EP10412 219 aaKnown RBP10.72□□□□□ -0.69
USB1-203ENST00000539737 M6PRP20645 277 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 TAS2R45P59539 299 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 DEFB1P60022 68 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 KHDC3LQ587J8 217 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 IGFL4Q6B9Z1 124 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 LINC00336Q6ZUF6 198 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 HSD17B11Q8NBQ5 300 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 OR4B1Q8NGF8 309 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 OR2G3Q8NGZ4 309 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 XCL2Q9UBD3 114 aa10.72□□□□□ -0.69
USB1-203ENST00000539737 TRBV19A0A075B6N1 114 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 TRAV10A0A0B4J240 114 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 H3BTX0 84 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 TAAR5O14804 337 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 PYYP10082 97 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 PSG9Q00887 426 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 ZNF345Q14585 488 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 C12orf74Q32Q52 190 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 Q6ZNX1 250 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 GNPNAT1Q96EK6 184 aaPredicted RBP10.71□□□□□ -0.69
USB1-203ENST00000539737 SAT2Q96F10 170 aaPredicted RBP10.71□□□□□ -0.69
USB1-203ENST00000539737 FAM167A-AS1Q96KT0 104 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 PAXXQ9BUH6 204 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 ZNF586Q9NXT0 402 aa10.71□□□□□ -0.69
USB1-203ENST00000539737 A8MTW9 85 aa10.7□□□□□ -0.7
USB1-203ENST00000539737 SMLR1H3BR10 107 aa10.7□□□□□ -0.7
USB1-203ENST00000539737 OR7C2O60412 319 aa10.7□□□□□ -0.7
USB1-203ENST00000539737 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
USB1-203ENST00000539737 MBP02144 154 aa10.7□□□□□ -0.7
USB1-203ENST00000539737 SNRPCP09234 159 aaKnown RBP10.7□□□□□ -0.7
USB1-203ENST00000539737 ATP6V0CP27449 155 aa10.7□□□□□ -0.7
USB1-203ENST00000539737 CNN1P51911 297 aaKnown RBP10.7□□□□□ -0.7
USB1-203ENST00000539737 RPUSD4Q96CM3 377 aaKnown RBP10.7□□□□□ -0.7
USB1-203ENST00000539737 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
USB1-203ENST00000539737 OR51M1Q9H341 326 aa10.7□□□□□ -0.7
USB1-203ENST00000539737 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
USB1-203ENST00000539737 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 A0A1W2PPV4 95 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 HMSDA8MTL9 139 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 AMBPP02760 352 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 UBE2L3P68036 154 aaKnown RBP10.69□□□□□ -0.7
USB1-203ENST00000539737 SERF2P84101 59 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 HIST1H1AQ02539 215 aaPredicted RBP10.69□□□□□ -0.7
USB1-203ENST00000539737 RPL7L1Q6DKI1 246 aaKnown RBP10.69□□□□□ -0.7
USB1-203ENST00000539737 OR8A1Q8NGG7 326 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 AAMDCQ9H7C9 122 aa10.69□□□□□ -0.7
USB1-203ENST00000539737 RAB2AP61019 212 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 POM121L12Q8N7R1 296 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 OR10G4Q8NGN3 311 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 OR10G9Q8NGN4 311 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 OR10G7Q8NGN6 311 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 OR10J6PQ8NGY7 276 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 BLNKQ8WV28 456 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 RNF141Q8WVD5 230 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 FXYD5Q96DB9 178 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 PRELID1Q9Y255 219 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 RFNGQ9Y644 331 aa10.68□□□□□ -0.7
USB1-203ENST00000539737 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 SMIM9A6NGZ8 99 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 NDUFB4O95168 129 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 OR10J4P0C629 311 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 NBEAP1P0C6P0 100 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 CDC34P49427 236 aaPredicted RBP10.67□□□□□ -0.7
USB1-203ENST00000539737 FAM122CQ6P4D5 195 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 AMTNQ6UX39 209 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 PQLC2Q6ZP29 291 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 KCNRGQ8N5I3 272 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 ARPC5LQ9BPX5 153 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 SLC35B3Q9H1N7 401 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 SH3BGRL3Q9H299 93 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 GOLT1BQ9Y3E0 138 aa10.67□□□□□ -0.7
USB1-203ENST00000539737 A0A0D9SG52 128 aa10.66□□□□□ -0.7
USB1-203ENST00000539737 BOLA2-SMG1P6H3BVE0 249 aa10.66□□□□□ -0.7
USB1-203ENST00000539737 SPART-AS1P0CW21 52 aa10.66□□□□□ -0.7
USB1-203ENST00000539737 FXYD7P58549 80 aa10.66□□□□□ -0.7
USB1-203ENST00000539737 TCTE3Q8IZS6 198 aa10.66□□□□□ -0.7
USB1-203ENST00000539737 OR11H4Q8NGC9 324 aa10.66□□□□□ -0.7
USB1-203ENST00000539737 NEU1Q99519 415 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms