RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 C3orf56Q8N813 242 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 SFTA2Q6UW10 78 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 TMEM141Q96I45 108 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 PRSS46E5RG02 174 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 SRSF2Q01130 221 aaKnown RBP5.23□□□□□ -1.57
LSAMP-207ENST00000539563 RNF144BQ7Z419 303 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 LY6G5BQ8NDX9 201 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 TIMM21Q9BVV7 248 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 KLF12Q9Y4X4 402 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 A0A0U1RRA0 63 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 APOC4P55056 127 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 SYNJ2BPP57105 145 aa5.23□□□□□ -1.57
LSAMP-207ENST00000539563 TRAV8-1A0A0A6YYK1 113 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 IGHV3-53P01767 116 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 AMN1Q8IY45 258 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 NDUFA4O00483 81 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 IGLV1-44P01699 117 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 ARMS2P0C7Q2 107 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 ESDP10768 282 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 DEFB131AP59861 70 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 C17orf58Q2M2W7 97 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 PCNX2A6NKB5 2137 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 DYSFO75923 2080 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 ATP6V0E1O15342 81 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 LINC00205P59089 165 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 Q6ZRM9 215 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 hDV102S1A0JD36 115 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 CEACAM8P31997 349 aaPredicted RBP5.22□□□□□ -1.57
LSAMP-207ENST00000539563 Q0VG73 95 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 FHL1Q13642 323 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 LAMTOR3Q9UHA4 124 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 NPC2P61916 151 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 HAPLN4Q86UW8 402 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 ANAPC13Q9BS18 74 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.22□□□□□ -1.57
LSAMP-207ENST00000539563 ZFAND6Q6FIF0 208 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 C5orf24Q7Z6I8 188 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 RNF223E7ERA6 249 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 C2orf82Q6UX34 121 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 TMEM14CQ9P0S9 112 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 ARFGEF3Q5TH69 2177 aa5.22□□□□□ -1.57
LSAMP-207ENST00000539563 TNFRSF6BO95407 300 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 C3orf79P0CE67 100 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 MLANAQ16655 118 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 PROK2Q9HC23 129 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 ZNF581Q9P0T4 197 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 TRBV25-1A0A075B6N4 114 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 PLA2G2CQ5R387 149 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 Q96MF0 132 aa5.21□□□□□ -1.57
LSAMP-207ENST00000539563 I3L3M4 83 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 CFHR2P36980 270 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 TMEM256Q8N2U0 113 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 C1orf159Q96HA4 380 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 LY6HO94772 140 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 RUSC1-AS1Q66K80 236 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 PRIMA1Q86XR5 153 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 NDUFS6O75380 124 aaKnown RBP5.21□□□□□ -1.58
LSAMP-207ENST00000539563 Q5PR19 223 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 SPAG8Q99932 426 aaPredicted RBP5.21□□□□□ -1.58
LSAMP-207ENST00000539563 MCRIP2Q9BUT9 160 aaKnown RBP5.21□□□□□ -1.58
LSAMP-207ENST00000539563 COL6A6A6NMZ7 2263 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 A0A087X0K7 114 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 F8WEM9 126 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 GAGE2EQ4V326 116 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 NEGR1Q7Z3B1 354 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 DMRTC2Q8IXT2 367 aaPredicted RBP5.21□□□□□ -1.58
LSAMP-207ENST00000539563 GAGE2DQ9UEU5 116 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 SMKR1H3BMG3 65 aa5.21□□□□□ -1.58
LSAMP-207ENST00000539563 A0A087WWL8 130 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 LY6G6EA0A0G2JKS1 128 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 GAGE2BQ13066 116 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 U3KQA8 63 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 OVOL3O00110 214 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 CHAC1Q9BUX1 264 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 SELENOKQ9Y6D0 94 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 H3BUA1 57 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 PFN1P07737 140 aaKnown RBP5.2□□□□□ -1.58
LSAMP-207ENST00000539563 SSBP2P81877 361 aaPredicted RBP5.2□□□□□ -1.58
LSAMP-207ENST00000539563 HS3ST6Q96QI5 342 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 UNC80Q8N2C7 3258 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 ALPK3Q96L96 1907 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 IGKV1-6A0A0C4DH72 117 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 AZU1P20160 251 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 DAD1P61803 113 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 C8orf86Q6ZUL3 223 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 LTBP2Q14767 1821 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 CADP27708 2225 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 E9PQ18 207 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 KIAA1549Q9HCM3 1950 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 TRBV19A0A075B6N1 114 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 H3BRN7 92 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 IGFL4Q6B9Z1 124 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 THAP8Q8NA92 274 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 SPXQ9BT56 116 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 ACACAQ13085 2346 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 CNOT1A5YKK6 2376 aaKnown RBP5.2□□□□□ -1.58
LSAMP-207ENST00000539563 INS-IGF2F8WCM5 200 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 Q8N8P6 123 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 C8orf49Q96NF6 230 aa5.2□□□□□ -1.58
LSAMP-207ENST00000539563 TRAV13-1A0A0B4J241 112 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms