RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 NEGR1Q7Z3B1 354 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 CBLN2Q8IUK8 224 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 GAPTQ8N292 157 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF664Q8N3J9 261 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 FTMTQ8N4E7 242 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 TEX29Q8N6K0 151 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC35G3Q8N808 338 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 YIPF7Q8N8F6 280 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 OR11H6Q8NGC7 330 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 OR51G1Q8NGK1 321 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC25A40Q8TBP6 338 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 C10orf105Q8TEF2 133 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 RAB2BQ8WUD1 216 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 DLX4Q92988 240 aaPredicted RBP1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 GPR146Q96CH1 333 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 ADAT3Q96EY9 351 aaPredicted RBP1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 PRAC1Q96KF2 57 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 CIB3Q96Q77 187 aaPredicted RBP1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 DERL3Q96Q80 235 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 SPACA5Q96QH8 159 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 KIR2DL4Q99706 377 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 MIEN1Q9BRT3 115 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM147Q9BVK8 224 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 C19orf24Q9BVV8 132 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 C1QTNF6Q9BXI9 259 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 SAMD10Q9BYL1 202 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 REG4Q9BYZ8 158 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 PBOV1Q9GZY1 135 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM222Q9H0R3 208 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 MED28Q9H204 178 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 SH3BGRL3Q9H299 93 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 ESM1Q9NQ30 184 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 NDUFB11Q9NX14 153 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 FKBP11Q9NYL4 201 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 KAAG1Q9UBP8 84 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 VAX2Q9UIW0 290 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 ORC6Q9Y5N6 252 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM14AQ9Y6G1 99 aa1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 HUWE1Q7Z6Z7 4374 aaKnown RBP1.39□□□□□ -2.19
CBX3P4-201ENST00000538909 IGHV4-30-2A0A087WSY4 118 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 A0A0A6YYD4 124 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 TRAV5A0A0B4J249 113 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 TRAV26-2A0A0B4J265 109 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 A0A0D9SG52 128 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 C5orf49A4QMS7 147 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 RBMY1BA6NDE4 496 aaKnown RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 A6NDN8 102 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 RBMY1EA6NEQ0 496 aaKnown RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 NCBP2LA6PVI3 153 aaKnown RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 KNCNA6PVL3 124 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 CD300LBA8K4G0 201 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF705FA8MVS1 300 aaPredicted RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM14DPA8MWL7 114 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 SRRM5B3KS81 715 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF670-ZNF695F2Z2N8 137 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 FNDC10F2Z333 226 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 M0R233 179 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 SLC17A2O00624 439 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 TNFSF12O43508 249 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF737O75373 536 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 OR2A4O95047 310 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 GABARAPO95166 117 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 GPX1P07203 203 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 CTSDP07339 412 aaPredicted RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 OR9G9P0C7N8 305 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 RBMY1DP0C7P1 496 aaKnown RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 FRMD6-AS1P0C7T7 363 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 IGLC6P0CF74 106 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF705DP0CH99 300 aaPredicted RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF705BP0CI00 300 aaPredicted RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 RBMY1A1P0DJD3 496 aaKnown RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 PGA5P0DJD9 388 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 CGB3P0DN86 165 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 CGB7P0DN87 165 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 FGF6P10767 208 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 PGAM2P15259 253 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 COL8A2P25067 703 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 SRIP30626 198 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 OR10J1P30954 320 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 SAA4P35542 130 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF83P51522 516 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 RND2P52198 227 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 UBE2NP61088 152 aaKnown RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 RND3P61587 244 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 CACNG7P62955 275 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 RPS27AP62979 156 aaKnown RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 SRPXP78539 464 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 IFITM3Q01628 133 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 AKR1C1Q04828 323 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 LOXL1Q08397 574 aaPredicted RBP1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 CATR1Q13166 79 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ARFRP1Q13795 201 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 INSL4Q14641 139 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 ZNF146Q15072 292 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM183BQ1AE95 376 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM155Q4W5P6 130 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 KHDC3LQ587J8 217 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 FAM201AQ5SY85 155 aa1.38□□□□□ -2.19
CBX3P4-201ENST00000538909 TMEM244Q5VVB8 128 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms