RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 CD28P10747 220 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 HERV-K104P63124 156 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 KRTAP1-1Q07627 177 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 SRSF7Q16629 238 aaKnown RBP eCLIP6.93□□□□□ -1.3
GGA3-202ENST00000538886 FAM71F2Q6NXP2 309 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 ZNF562Q6V9R5 426 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 ODF3L1Q8IXM7 274 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 Q8N9W7 124 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 OR11H1Q8NG94 326 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 TSSC4Q9Y5U2 329 aaPredicted RBP6.93□□□□□ -1.3
GGA3-202ENST00000538886 A0A087X0K7 114 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 IGLC7A0M8Q6 106 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 PRB4P10163 310 aaPredicted RBP6.93□□□□□ -1.3
GGA3-202ENST00000538886 KRTAP24-1Q3LI83 254 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 TEX45Q8NA69 505 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 A0A0G2JLM5 398 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 GPX1P07203 203 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 HBG1P69891 147 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 HBG2P69892 147 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 TMEM187Q14656 261 aa6.93□□□□□ -1.3
GGA3-202ENST00000538886 TRAV9-2A0A087WT02 112 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 TEX50A0A1B0GTY4 177 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 A0A1W2PPV4 95 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 FAM231BA6NCW3 169 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 C17orf112F2Z3M2 114 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 STAG3L2P0CL84 134 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 SYNJ2BPP57105 145 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 MLANAQ16655 118 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 C5orf56Q8N8D9 126 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 SPCS1Q9Y6A9 102 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 A6NDX4 124 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 ZNF585BQ52M93 769 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 OR2K2Q8NGT1 345 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 NPIPB3Q92617 1050 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 IGHV7-81A0A0B4J1V7 117 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 A0A0G2JRQ6 117 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 TAX1BP3O14907 124 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 CA1P00915 261 aaPredicted RBP6.92□□□□□ -1.3
GGA3-202ENST00000538886 CFPP27918 469 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 HSD52Q0P140 79 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 C5orf30Q96GV9 206 aa6.92□□□□□ -1.3
GGA3-202ENST00000538886 IGKV1-5P01602 117 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 IGLL1P15814 213 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 RBPMS2Q6ZRY4 209 aaKnown RBP6.91□□□□□ -1.3
GGA3-202ENST00000538886 OR4A5Q8NH83 315 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 BLNKQ8WV28 456 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 PYGO2Q9BRQ0 406 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 G3V4G9 280 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 FAM106AQ4KMX7 169 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 TM4SF20Q53R12 229 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 Q6ZRM9 215 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 Q6ZS49 121 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 OR10G4Q8NGN3 311 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 C21orf62Q9NYP8 219 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 OR4C46A6NHA9 309 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 ZNF324O75467 553 aaPredicted RBP6.91□□□□□ -1.3
GGA3-202ENST00000538886 PRB2P02812 416 aaPredicted RBP6.91□□□□□ -1.3
GGA3-202ENST00000538886 RNASE1P07998 156 aaKnown RBP6.91□□□□□ -1.3
GGA3-202ENST00000538886 HIST1H1EP10412 219 aaKnown RBP6.91□□□□□ -1.3
GGA3-202ENST00000538886 NDPQ00604 133 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 LHFPL1Q86WI0 220 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 BPIFA4PQ86YQ2 179 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 OR10G9Q8NGN4 311 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 OR10G7Q8NGN6 311 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 EEF1AKMT3Q96AZ1 226 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 PMCHL2Q9BQD1 86 aa6.91□□□□□ -1.3
GGA3-202ENST00000538886 ZNF331Q9NQX6 463 aaPredicted RBP6.91□□□□□ -1.3
GGA3-202ENST00000538886 hDV102S1A0JD36 115 aa6.9□□□□□ -1.3
GGA3-202ENST00000538886 HAPLN4Q86UW8 402 aa6.9□□□□□ -1.3
GGA3-202ENST00000538886 MFAP4P55083 255 aa6.9□□□□□ -1.3
GGA3-202ENST00000538886 PRIMA1Q86XR5 153 aa6.9□□□□□ -1.3
GGA3-202ENST00000538886 OR10AG1Q8NH19 301 aa6.9□□□□□ -1.3
GGA3-202ENST00000538886 KCNS1Q96KK3 526 aa6.9□□□□□ -1.3
GGA3-202ENST00000538886 C15orf61A6NNL5 157 aa6.9□□□□□ -1.31
GGA3-202ENST00000538886 TMEM250H0YL14 139 aa6.9□□□□□ -1.31
GGA3-202ENST00000538886 GATA2P23769 480 aaPredicted RBP6.9□□□□□ -1.31
GGA3-202ENST00000538886 UBE2G1P62253 170 aa6.9□□□□□ -1.31
GGA3-202ENST00000538886 PRR31Q5SQ13 230 aa6.9□□□□□ -1.31
GGA3-202ENST00000538886 CFHR4Q92496 578 aa6.9□□□□□ -1.31
GGA3-202ENST00000538886 A6NDN8 102 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 ZNF785A8K8V0 405 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 FABP2P12104 132 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 TMEM167AQ8TBQ9 72 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 MRAPQ8TCY5 172 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 PSMG3Q9BT73 122 aaPredicted RBP6.89□□□□□ -1.31
GGA3-202ENST00000538886 CR1P17927 2039 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 TEX48A0A1B0GUV7 120 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 E7EUB6 86 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 OR4F17Q8NGA8 305 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 MDFIQ99750 246 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 MCRIP2Q9BUT9 160 aaKnown RBP6.89□□□□□ -1.31
GGA3-202ENST00000538886 SLC38A11Q08AI6 406 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 BVES-AS1Q5T3Y7 98 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 RNF5Q99942 180 aa6.89□□□□□ -1.31
GGA3-202ENST00000538886 HLA-DRB1P01911 266 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 TYMSP04818 313 aa6.88□□□□□ -1.31
GGA3-202ENST00000538886 CAMPP49913 170 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms