RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 U3KQK5 164 aa9.54□□□□□ -0.88
CHFR-216ENST00000538235 KIR2DL5BA0A0G2JN68 375 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 KIR2DL5BA0A0G2JPC4 375 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
CHFR-216ENST00000538235 RBMY1A1P0DJD3 496 aaKnown RBP9.53□□□□□ -0.88
CHFR-216ENST00000538235 RBMY1CP0DJD4 496 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 ARL14EPLP0DKL9 152 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 CNN1P51911 297 aaKnown RBP9.53□□□□□ -0.88
CHFR-216ENST00000538235 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 RBMY1FQ15415 496 aaKnown RBP9.53□□□□□ -0.88
CHFR-216ENST00000538235 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
CHFR-216ENST00000538235 STHQ8IWL8 128 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 KIR2DL5AQ8N109 375 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 ZNF738Q8NE65 137 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 KIR2DL5BQ8NHK3 375 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 RAB24Q969Q5 203 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 SPATA25Q9BR10 227 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 PAXXQ9BUH6 204 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 OR51M1Q9H341 326 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 EDA2RQ9HAV5 297 aa9.53□□□□□ -0.88
CHFR-216ENST00000538235 BORCS7-ASMTA0A0B4J1R7 106 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 OR7C2O60412 319 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 STAG3L2P0CL84 134 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 STAG3L3P0CL85 134 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 ID1P41134 155 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 CDC34P49427 236 aaPredicted RBP9.52□□□□□ -0.89
CHFR-216ENST00000538235 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
CHFR-216ENST00000538235 RHOBP62745 196 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 UBE2L3P68036 154 aaKnown RBP9.52□□□□□ -0.89
CHFR-216ENST00000538235 TMEM41BQ5BJD5 291 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 RNF141Q8WVD5 230 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 RPUSD4Q96CM3 377 aaKnown RBP9.52□□□□□ -0.89
CHFR-216ENST00000538235 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 CSTL1Q9H114 145 aa9.52□□□□□ -0.89
CHFR-216ENST00000538235 DYNC2H1Q8NCM8 4307 aaKnown RBP9.52□□□□□ -0.89
CHFR-216ENST00000538235 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 TAAR5O14804 337 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 CRXO43186 299 aaPredicted RBP9.51□□□□□ -0.89
CHFR-216ENST00000538235 ZNF253O75346 499 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 JTBO76095 146 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 NBEAP1P0C6P0 100 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 NHLRC4P0CG21 123 aaPredicted RBP9.51□□□□□ -0.89
CHFR-216ENST00000538235 APOC4P55056 127 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 BTN1A1Q13410 526 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
CHFR-216ENST00000538235 OR8A1Q8NGG7 326 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 RNF183Q96D59 192 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 ZNF471Q9BX82 626 aaPredicted RBP9.51□□□□□ -0.89
CHFR-216ENST00000538235 TMPRSS5Q9H3S3 457 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 X6R8D5 127 aa9.51□□□□□ -0.89
CHFR-216ENST00000538235 IGKV2-40A0A087WW87 121 aaPredicted RBP9.5□□□□□ -0.89
CHFR-216ENST00000538235 M0R2Z0 102 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 IGKV2D-40P01614 121 aaPredicted RBP9.5□□□□□ -0.89
CHFR-216ENST00000538235 NMBP08949 121 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 S100A7P31151 101 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 FGF8P55075 233 aaPredicted RBP9.5□□□□□ -0.89
CHFR-216ENST00000538235 SERF2P84101 59 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
CHFR-216ENST00000538235 ERCC8Q13216 396 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 ICAM4Q14773 271 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 KHDC3LQ587J8 217 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 STOML3Q8TAV4 291 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 TMED6Q8WW62 240 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 GNPNAT1Q96EK6 184 aaPredicted RBP9.5□□□□□ -0.89
CHFR-216ENST00000538235 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
CHFR-216ENST00000538235 KANTRA0A1W2PQU2 76 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 GCHFRP30047 84 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 EIF5AP63241 154 aaKnown RBP9.49□□□□□ -0.89
CHFR-216ENST00000538235 PDE6HQ13956 83 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 GUK1Q16774 197 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 SPINK13Q1W4C9 94 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 SAMD13Q5VXD3 122 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 Q6ZWC4 215 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 BAP18Q8IXM2 172 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 LINC00518Q8N0U6 118 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 SVBPQ8N300 66 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 Q9H3A6 140 aa9.49□□□□□ -0.89
CHFR-216ENST00000538235 GGTLC3B5MD39 225 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 NPIPB6E9PJ23 425 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 SPRY2O43597 315 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 PRM2P04554 102 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 CT45A10P0DMU9 189 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 GNG5P63218 68 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 PRR9Q5T870 116 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 BIN3Q9NQY0 253 aa9.48□□□□□ -0.89
CHFR-216ENST00000538235 TRAV12-2A0A075B6T6 113 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 CTXND1A0A1B0GTU2 59 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 A0A1W2PPV4 95 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 UBE2CO00762 179 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 DEFB4AO15263 64 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 H2AFB1P0C5Y9 115 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 SEC11BP0C7V7 166 aa9.47□□□□□ -0.89
CHFR-216ENST00000538235 RANP62826 216 aaKnown RBP9.47□□□□□ -0.89
CHFR-216ENST00000538235 EIF5AL1Q6IS14 154 aaKnown RBP9.47□□□□□ -0.89
CHFR-216ENST00000538235 EBLN2Q6P2I7 272 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms