RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 H3BQ15 152 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 RPL19P84098 196 aaKnown RBP5.51□□□□□ -1.53
MSH6-209ENST00000538136 TMEM14EPQ6UXP3 125 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 OR11H2Q8NH07 326 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 MCRIP2Q9BUT9 160 aaKnown RBP5.51□□□□□ -1.53
MSH6-209ENST00000538136 CTXND1A0A1B0GTU2 59 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 SCO2A0A1W2PP80 73 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 NDUFA4O00483 81 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 CHEK1O14757 476 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 IGF1P05019 195 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 KHDC3LQ587J8 217 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 TMEM41BQ5BJD5 291 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 FAM209BQ5JX69 171 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 C8orf31Q8N9H6 132 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 C5orf17Q8NAS9 161 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 TMEM170AQ8WVE7 144 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 A0A1W2PPQ1 181 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 TMEM213A2RRL7 107 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 CXorf1O96002 111 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 SFTA3P0C7M3 94 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 GUK1Q16774 197 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 VN1R17PQ8TDU5 208 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 TMEM190Q8WZ59 177 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 LINC00574Q9H8X3 128 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 MLXQ9UH92 298 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 POLR3KQ9Y2Y1 108 aaPredicted RBP5.51□□□□□ -1.53
MSH6-209ENST00000538136 PHLDA3Q9Y5J5 127 aa5.51□□□□□ -1.53
MSH6-209ENST00000538136 RBFOX3A6NFN3 312 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 SLC17A3O00476 420 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 ZNF343Q6P1L6 599 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 DMRT1Q9Y5R6 373 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 IGLL5B9A064 214 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 PRAC2D3DTV9 90 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 FAM24BQ8N5W8 94 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 Q8N6K4 173 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 DPH3Q96FX2 82 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 DERL1Q9BUN8 251 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 TMEM167BQ9NRX6 74 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 UMAD1C9J7I0 102 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 TAGLN2P37802 199 aaKnown RBP5.5□□□□□ -1.53
MSH6-209ENST00000538136 AANATQ16613 207 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 DMRTA1Q5VZB9 504 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 SMIM15Q7Z3B0 74 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 NEU1Q99519 415 aa5.5□□□□□ -1.53
MSH6-209ENST00000538136 TRGV4A0A0C4DH28 118 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 FSTL3O95633 263 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 IGHV4-30-4P0DP06 118 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 CYB561D1Q8N8Q1 229 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 TOMM40O96008 361 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 EBI3Q14213 229 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 PEA15Q15121 130 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 DEFB114Q30KQ6 69 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 GDF5OSQ5U4N7 250 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 LRTM2Q8N967 370 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 VGLL1Q99990 258 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 ANAPC10Q9UM13 185 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 BTN1A1Q13410 526 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 ZNF56Q15929 161 aa5.49□□□□□ -1.53
MSH6-209ENST00000538136 NOP10Q9NPE3 64 aaKnown RBP5.49□□□□□ -1.53
MSH6-209ENST00000538136 SRRM2Q9UQ35 2752 aaKnown RBP5.49□□□□□ -1.53
MSH6-209ENST00000538136 A0A087WWL8 130 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 H3BVH4 76 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 M0R2N4 97 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 MPDU1O75352 247 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 FRMD6-AS1P0C7T7 363 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 POU2AF1Q16633 256 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 GOLT1BQ9Y3E0 138 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 IGLV2-18A0A075B6J9 118 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 LOC102724200A0A096LPH7 203 aaPredicted RBP5.48□□□□□ -1.53
MSH6-209ENST00000538136 P01737 135 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 TRGV9Q99603 122 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 GSN-AS1Q9NRJ2 163 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 C9orf62Q8N4C0 152 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 C15orf54Q8N8G6 183 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 AQP10Q96PS8 301 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 TSPOP30536 169 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 RAB5CP51148 216 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 TCTAP57738 103 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 PGLYRP4Q96LB8 373 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 RCHY1Q96PM5 261 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 CSTL1Q9H114 145 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 SIGLEC8Q9NYZ4 499 aa5.48□□□□□ -1.53
MSH6-209ENST00000538136 RPL29P47914 159 aaKnown RBP5.47□□□□□ -1.53
MSH6-209ENST00000538136 DAD1P61803 113 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 TWIST1Q15672 202 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 MRPL16Q9NX20 251 aaKnown RBP5.47□□□□□ -1.53
MSH6-209ENST00000538136 ZMAT5Q9UDW3 170 aaKnown RBP5.47□□□□□ -1.53
MSH6-209ENST00000538136 LOC389332A0A1B0GUA5 103 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 H7BYZ3 331 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 ISLRO14498 428 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 BUB3O43684 328 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 GATCO43716 136 aaKnown RBP5.47□□□□□ -1.53
MSH6-209ENST00000538136 SCO1O75880 301 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 SERF2P84101 59 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 PSG3Q16557 428 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 PATE2Q6UY27 113 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 MARC2Q969Z3 335 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 ISOC2Q96AB3 205 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 ZNF586Q9NXT0 402 aa5.47□□□□□ -1.53
MSH6-209ENST00000538136 ZNF469Q96JG9 3925 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms