RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 IGKV1-39P01597 117 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 IGHV4-59P01825 116 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 IGKV1D-39P04432 117 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 PMVKQ15126 192 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 C8orf86Q6ZUL3 223 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
LINC00346-201ENST00000538077 TRBV25-1A0A075B6N4 114 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 LINC01551Q86U37 167 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 PLEKHB2Q96CS7 222 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 TP53TG1Q9Y2A0 90 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 ZNF833PQ6ZTB9 187 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 TRPT1Q86TN4 253 aaKnown RBP8.97□□□□□ -0.97
LINC00346-201ENST00000538077 KNTC1P50748 2209 aa8.97□□□□□ -0.97
LINC00346-201ENST00000538077 YLPM1P49750 1951 aaKnown RBP8.97□□□□□ -0.97
LINC00346-201ENST00000538077 RSPO3Q9BXY4 272 aaPredicted RBP8.96□□□□□ -0.97
LINC00346-201ENST00000538077 EREGO14944 169 aa8.96□□□□□ -0.97
LINC00346-201ENST00000538077 RPL32P62910 135 aaKnown RBP8.96□□□□□ -0.97
LINC00346-201ENST00000538077 ZNF562Q6V9R5 426 aa8.96□□□□□ -0.97
LINC00346-201ENST00000538077 HAPLN4Q86UW8 402 aa8.96□□□□□ -0.97
LINC00346-201ENST00000538077 RASL11AQ6T310 242 aa8.96□□□□□ -0.98
LINC00346-201ENST00000538077 IGKV1-6A0A0C4DH72 117 aa8.96□□□□□ -0.98
LINC00346-201ENST00000538077 SPRNQ5BIV9 151 aa8.96□□□□□ -0.98
LINC00346-201ENST00000538077 A8MWV9 139 aa8.96□□□□□ -0.98
LINC00346-201ENST00000538077 MMP23AO75900 390 aa8.96□□□□□ -0.98
LINC00346-201ENST00000538077 BCL6BQ8N143 479 aaPredicted RBP8.96□□□□□ -0.98
LINC00346-201ENST00000538077 NDUFAF3Q9BU61 184 aa8.96□□□□□ -0.98
LINC00346-201ENST00000538077 ANAPC10Q9UM13 185 aa8.96□□□□□ -0.98
LINC00346-201ENST00000538077 LOXP28300 417 aaPredicted RBP8.95□□□□□ -0.98
LINC00346-201ENST00000538077 Q6ZQT7 251 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 TMEM256Q8N2U0 113 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 FAM215AQ9Y5M1 114 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 TNFRSF6BO95407 300 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 Q9HAA7 133 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 IGKV1OR2-108A0A075B7D4 117 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 FGF16O43320 207 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 VWC2Q2TAL6 325 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 SUMO4Q6EEV6 95 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 APRG1Q8IVJ8 170 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 TRBV6-6A0A0A6YYG2 114 aa8.95□□□□□ -0.98
LINC00346-201ENST00000538077 MYMXA0A1B0GTQ4 84 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 WT1P19544 449 aaPredicted RBP8.94□□□□□ -0.98
LINC00346-201ENST00000538077 GAGE2AQ6NT46 116 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 IGFL3Q6UXB1 125 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 ATP6V0BQ99437 205 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 NOP10Q9NPE3 64 aaKnown RBP8.94□□□□□ -0.98
LINC00346-201ENST00000538077 FANCMQ8IYD8 2048 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 FOXL2NBQ6ZUU3 175 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 ESDP10768 282 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 NBL1P41271 181 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 GAGE2EQ4V326 116 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 TMEM75Q8N9X5 138 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 Q8TCH9 128 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 ZNF524Q96C55 264 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 GAGE2DQ9UEU5 116 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 IGLV3-9A0A075B6K5 115 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 CABIN1Q9Y6J0 2220 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 HSD52Q0P140 79 aa8.94□□□□□ -0.98
LINC00346-201ENST00000538077 IGHV1OR15-1A0A075B7D0 117 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 SLURP1P55000 103 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 NDUFA4L2Q9NRX3 87 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 DEFB113Q30KQ7 82 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 C2orf82Q6UX34 121 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 TMEM126AQ9H061 195 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 TP53BP1Q12888 1972 aaPredicted RBP8.93□□□□□ -0.98
LINC00346-201ENST00000538077 IGKV2D-24A0A075B6R9 120 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 TRAV25A0A0B4J276 109 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 F6UB75 175 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 J3QLI3 93 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 SPRY2O43597 315 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 ANGP03950 147 aaKnown RBP8.93□□□□□ -0.98
LINC00346-201ENST00000538077 LGALS1P09382 135 aaKnown RBP8.93□□□□□ -0.98
LINC00346-201ENST00000538077 I3L3M4 83 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 IGHV4-38-2P0DP08 117 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 FER1L5A0AVI2 2057 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.93□□□□□ -0.98
LINC00346-201ENST00000538077 FHL1Q13642 323 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 STPG4Q8N801 248 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
LINC00346-201ENST00000538077 PFN1P07737 140 aaKnown RBP8.92□□□□□ -0.98
LINC00346-201ENST00000538077 LYPD1Q8N2G4 141 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 LY6G5BQ8NDX9 201 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 CYYR1Q96J86 154 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 SHISA9B4DS77 424 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 EDA2RQ9HAV5 297 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 SMPXQ9UHP9 88 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 TSSC4Q9Y5U2 329 aaPredicted RBP8.92□□□□□ -0.98
LINC00346-201ENST00000538077 MPDZO75970 2070 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 IGHV4-30-2A0A087WSY4 118 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 AMBPP02760 352 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 ZNF134P52741 427 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 TMEM14BQ9NUH8 114 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 C22orf46C9J442 243 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 CCL24O00175 119 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 HLA-DMBP28068 263 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 DKK4Q9UBT3 224 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 KLF12Q9Y4X4 402 aa8.92□□□□□ -0.98
LINC00346-201ENST00000538077 PTPRDP23468 1912 aa8.91□□□□□ -0.98
LINC00346-201ENST00000538077 PRSS29PA6NIE9 313 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms