RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 SLC50A1Q9BRV3 221 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 DKK2Q9UBU2 259 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 TIMM9Q9Y5J7 89 aa10.66□□□□□ -0.7
LRRK1-211ENST00000538064 BORCS7-ASMTA0A0B4J1R7 106 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 TRAV5A0A0B4J249 113 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 LOC102723971A0A1B0GUV8 181 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 G3V3Q6 166 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 ARPC5O15511 151 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 CNN1P51911 297 aaKnown RBP10.65□□□□□ -0.7
LRRK1-211ENST00000538064 ACOT6Q3I5F7 207 aaPredicted RBP10.65□□□□□ -0.7
LRRK1-211ENST00000538064 GCSAMLQ5JQS6 135 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 ZNF738Q8NE65 137 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 NDUFAF3Q9BU61 184 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 TMEM14CQ9P0S9 112 aa10.65□□□□□ -0.7
LRRK1-211ENST00000538064 TAAR5O14804 337 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 INSP01308 110 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 IGLC2P0DOY2 106 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 RRN3P1Q2M238 152 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 FAM222AQ5U5X8 452 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 FUT9Q9Y231 359 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 DNAH2Q9P225 4427 aa10.64□□□□□ -0.71
LRRK1-211ENST00000538064 FAT2Q9NYQ8 4349 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 SMLR1H3BR10 107 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 HIST1H1EP10412 219 aaKnown RBP10.63□□□□□ -0.71
LRRK1-211ENST00000538064 TAS2R45P59539 299 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 RHOBP62745 196 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 SPINK13Q1W4C9 94 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 MIR17HGQ75NE6 70 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 HSD17B11Q8NBQ5 300 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 GNPNAT1Q96EK6 184 aaPredicted RBP10.63□□□□□ -0.71
LRRK1-211ENST00000538064 FAM210BQ96KR6 192 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 NIPSNAP3BQ9BS92 247 aa10.63□□□□□ -0.71
LRRK1-211ENST00000538064 PSMG3Q9BT73 122 aaPredicted RBP10.63□□□□□ -0.71
LRRK1-211ENST00000538064 YTHDF2Q9Y5A9 579 aaKnown RBP10.63□□□□□ -0.71
LRRK1-211ENST00000538064 DNAH17Q9UFH2 4485 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 HMSDA8MTL9 139 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 M0R2Z0 102 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 CRXO43186 299 aaPredicted RBP10.62□□□□□ -0.71
LRRK1-211ENST00000538064 MBP02144 154 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 SNRPCP09234 159 aaKnown RBP10.62□□□□□ -0.71
LRRK1-211ENST00000538064 P0DMU3 169 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 FAM231AP0DMU4 169 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 FAM231CP0DMU5 169 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 M6PRP20645 277 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 PSG3Q16557 428 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 TMEM208Q9BTX3 173 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 SLC25A2Q9BXI2 301 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 OR51M1Q9H341 326 aa10.62□□□□□ -0.71
LRRK1-211ENST00000538064 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
LRRK1-211ENST00000538064 A0A1W2PPV4 95 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 H3BQ15 152 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 ZNF253O75346 499 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 ATP6V0CP27449 155 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 SERF2P84101 59 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
LRRK1-211ENST00000538064 ZNF345Q14585 488 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 RPL7L1Q6DKI1 246 aaKnown RBP10.61□□□□□ -0.71
LRRK1-211ENST00000538064 BAP18Q8IXM2 172 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 OR8A1Q8NGG7 326 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 OR2G3Q8NGZ4 309 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 PAXXQ9BUH6 204 aa10.61□□□□□ -0.71
LRRK1-211ENST00000538064 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 A0A0D9SG52 128 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 H3BTX0 84 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 OR7C2O60412 319 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 PYYP10082 97 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 PDE6HQ13956 83 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 KHDC3LQ587J8 217 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 POM121L12Q8N7R1 296 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 OR10G4Q8NGN3 311 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 OR10G9Q8NGN4 311 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 OR10G7Q8NGN6 311 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 SAT2Q96F10 170 aaPredicted RBP10.6□□□□□ -0.71
LRRK1-211ENST00000538064 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 ARPC5LQ9BPX5 153 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 ZNF586Q9NXT0 402 aa10.6□□□□□ -0.71
LRRK1-211ENST00000538064 FAM122CQ6P4D5 195 aa10.59□□□□□ -0.71
LRRK1-211ENST00000538064 TCTE3Q8IZS6 198 aa10.59□□□□□ -0.71
LRRK1-211ENST00000538064 KCNRGQ8N5I3 272 aa10.59□□□□□ -0.71
LRRK1-211ENST00000538064 BLNKQ8WV28 456 aa10.59□□□□□ -0.71
LRRK1-211ENST00000538064 RNF141Q8WVD5 230 aa10.59□□□□□ -0.71
LRRK1-211ENST00000538064 RPUSD4Q96CM3 377 aaKnown RBP10.59□□□□□ -0.71
LRRK1-211ENST00000538064 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
LRRK1-211ENST00000538064 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
LRRK1-211ENST00000538064 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 TRAV12-2A0A075B6T6 113 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 LYRM9A8MSI8 78 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
LRRK1-211ENST00000538064 SLC17A3O00476 420 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 NBEAP1P0C6P0 100 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 TSPOP30536 169 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 RAB2AP61019 212 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 DAD1P61803 113 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 TMEM256Q8N2U0 113 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 OR11H4Q8NGC9 324 aa10.58□□□□□ -0.72
LRRK1-211ENST00000538064 ST6GAL2Q96JF0 529 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms