RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LOXL3P58215 753 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 HOXA4Q00056 320 aaPredicted RBP9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 FHL3Q13643 280 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 Q9UFV3 132 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 UFC1Q9Y3C8 167 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 ALKBH6Q3KRA9 238 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 Q6AWC8 147 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 ZNF562Q6V9R5 426 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 Q86TA4 180 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 NFE4Q86UQ8 179 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 CIARTQ8N365 385 aaPredicted RBP9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 VCX2Q9H322 139 aa9.02□□□□□ -0.97
SEMA4D-221ENST00000537934 K7EMI3 77 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 IGHV3-13P01766 116 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 EVI2AP22794 236 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 FXYD7P58549 80 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 KLRB1Q12918 225 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 EDDM3AQ14507 147 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 TBC1D28Q2M2D7 210 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 CFAP126Q5VTH2 177 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 C1orf162Q8NEQ5 155 aaPredicted RBP9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 SRSF12Q8WXF0 261 aaKnown RBP9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 SVEP1Q4LDE5 3571 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 IGKV3-15P01624 115 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 PPIFP30405 207 aaKnown RBP9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 PRORYQ9H606 182 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 CFAP46Q8IYW2 2715 aa9.01□□□□□ -0.97
SEMA4D-221ENST00000537934 USP24Q9UPU5 2620 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 IQCF6A8MYZ5 107 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 PLAUP00749 431 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 FAM27E3Q08E93 113 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 KLF17Q5JT82 389 aaPredicted RBP9□□□□□ -0.97
SEMA4D-221ENST00000537934 ZFAND6Q6FIF0 208 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 ORMDL3Q8N138 153 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 ZNF436-AS1Q8NC38 126 aaPredicted RBP9□□□□□ -0.97
SEMA4D-221ENST00000537934 IGSF10Q6WRI0 2623 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 CECR9P0C854 216 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
SEMA4D-221ENST00000537934 C22orf34Q6ZV56 151 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 SRSF8Q9BRL6 282 aaKnown RBP9□□□□□ -0.97
SEMA4D-221ENST00000537934 Q9H3A6 140 aa9□□□□□ -0.97
SEMA4D-221ENST00000537934 PLCE1Q9P212 2302 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 IGKV1D-37A0A075B6S9 117 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 THBDP07204 575 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 MPV17P39210 176 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 GLMPQ8WWB7 406 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 OBP2BQ9NPH6 170 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 ZFYVE26Q68DK2 2539 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 IGKCP01834 107 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 SAA2P0DJI9 122 aaPredicted RBP8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 RPL32P62910 135 aaKnown RBP8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 FAM104BQ5XKR9 115 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 TEX29Q8N6K0 151 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 CD177Q8N6Q3 437 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 SLC25A15Q9Y619 301 aa8.99□□□□□ -0.97
SEMA4D-221ENST00000537934 ZNF785A8K8V0 405 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 RAX2Q96IS3 184 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 IGHV1-18A0A0C4DH31 117 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 TRBV6-1A0A0K0K1D8 114 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 CNIH1O95406 144 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 IGLV2-11P01706 119 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 NHLRC4P0CG21 123 aaPredicted RBP8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 ERHP84090 104 aaKnown RBP8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 PRNTQ86SH4 94 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 GTSCR1Q86UQ5 136 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 PPDPFLQ8WWR9 84 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 TMEM133Q9H2Q1 129 aa8.98□□□□□ -0.97
SEMA4D-221ENST00000537934 TRAV8-1A0A0A6YYK1 113 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 IGLV1-44P01699 117 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 MOGAT3Q86VF5 341 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 WFDC3Q8IUB2 231 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 TMEM158Q8WZ71 300 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 FLYWCH2Q96CP2 140 aaKnown RBP8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 CXXC4Q9H2H0 198 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 TNFRSF18Q9Y5U5 241 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 TANC2Q9HCD6 1990 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 DYSFO75923 2080 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 GP9P14770 177 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 HOXB4P17483 251 aaPredicted RBP8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 ORM2P19652 201 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 PRDX2P32119 198 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 FZR1Q9UM11 496 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 CACNA1BQ00975 2339 aa8.97□□□□□ -0.97
SEMA4D-221ENST00000537934 INS-IGF2F8WCM5 200 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 RBP4P02753 201 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 AMN1Q8IY45 258 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 ZCCHC24Q8N2G6 241 aaKnown RBP8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 FAM169BQ8N8A8 192 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 LEAP2Q969E1 77 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 CARD19Q96LW7 228 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 HIST1H4GQ99525 98 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 OTORQ9NRC9 128 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 NDUFA4L2Q9NRX3 87 aa8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 SPTAN1Q13813 2472 aaKnown RBP8.96□□□□□ -0.97
SEMA4D-221ENST00000537934 FAM90A27PA6NNH2 459 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms