RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
DDB1-209ENST00000537877 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 SNAPINO95295 136 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 ID1P41134 155 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 UBE2G1P62253 170 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 PAFAH1B2P68402 229 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 TMEM183BQ1AE95 376 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 DCANP1Q8TF63 244 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 TMEM158Q8WZ71 300 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 TVP23CQ96ET8 276 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 ZNF747Q9BV97 191 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 KLF12Q9Y4X4 402 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 LY96Q9Y6Y9 160 aa9.31□□□□□ -0.92
DDB1-209ENST00000537877 IGKV3-7A0A075B6H7 116 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 TRBV6-1A0A0K0K1D8 114 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 TSPAN4O14817 238 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 PSG3Q16557 428 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 GUCA2BQ16661 112 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 TMEM241Q24JQ0 296 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 DEFB114Q30KQ6 69 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 LCN12Q6JVE5 192 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 TMEM75Q8N9X5 138 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 MS4A6AQ9H2W1 248 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 SDF2L1Q9HCN8 221 aa9.3□□□□□ -0.92
DDB1-209ENST00000537877 NIPBLQ6KC79 2804 aaeCLIP9.29□□□□□ -0.92
DDB1-209ENST00000537877 TRBV20OR9-2A0A075B6H5 130 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 RBAKDNA6NC62 111 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 K7EQG2 157 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 DNASE2O00115 360 aaPredicted RBP9.29□□□□□ -0.92
DDB1-209ENST00000537877 HLA-DMBP28068 263 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 GNG4P50150 75 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 CENPWQ5EE01 88 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 IGFL4Q6B9Z1 124 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 RBPMS2Q6ZRY4 209 aaKnown RBP9.29□□□□□ -0.92
DDB1-209ENST00000537877 RNF182Q8N6D2 247 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 OR2K2Q8NGT1 345 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 SMIM12Q96EX1 92 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 IGF2BP2-AS1Q96M15 143 aa9.29□□□□□ -0.92
DDB1-209ENST00000537877 SNRPD3P62318 126 aaKnown RBP9.28□□□□□ -0.92
DDB1-209ENST00000537877 SHISA2Q6UWI4 295 aa9.28□□□□□ -0.92
DDB1-209ENST00000537877 C12orf54Q6X4T0 127 aa9.28□□□□□ -0.92
DDB1-209ENST00000537877 Q86TA4 180 aa9.28□□□□□ -0.92
DDB1-209ENST00000537877 TMEM61Q8N0U2 210 aa9.28□□□□□ -0.92
DDB1-209ENST00000537877 GBGT1Q8N5D6 347 aa9.28□□□□□ -0.92
DDB1-209ENST00000537877 CLRN3Q8NCR9 226 aa9.28□□□□□ -0.92
DDB1-209ENST00000537877 ZNF738Q8NE65 137 aa9.28□□□□□ -0.92
DDB1-209ENST00000537877 SPAG8Q99932 426 aaPredicted RBP9.28□□□□□ -0.92
DDB1-209ENST00000537877 IGKV2-40A0A087WW87 121 aaPredicted RBP9.27□□□□□ -0.93
DDB1-209ENST00000537877 TRAV34A0A0B4J273 112 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 M0R036 132 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 SAP30O75446 220 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 IGKV2D-40P01614 121 aaPredicted RBP9.27□□□□□ -0.93
DDB1-209ENST00000537877 RPL23P62829 140 aaKnown RBP9.27□□□□□ -0.93
DDB1-209ENST00000537877 FLI1Q01543 452 aaPredicted RBP9.27□□□□□ -0.93
DDB1-209ENST00000537877 RHEBQ15382 184 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 CD300EQ496F6 205 aaPredicted RBP9.27□□□□□ -0.93
DDB1-209ENST00000537877 LINC01551Q86U37 167 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 C3orf56Q8N813 242 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 C20orf173Q96LM9 149 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 LINC00479Q96M42 142 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 SELENOKQ9Y6D0 94 aa9.27□□□□□ -0.93
DDB1-209ENST00000537877 OR4C46A6NHA9 309 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 ZNF705FA8MVS1 300 aaPredicted RBP9.26□□□□□ -0.93
DDB1-209ENST00000537877 B4DEV8 164 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 LTAP01374 205 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 TFPI2P48307 235 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 ADIRFQ15847 76 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 BAGE2Q86Y30 109 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 WFDC3Q8IUB2 231 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 PSG8Q9UQ74 426 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 ZFP30Q9Y2G7 519 aa9.26□□□□□ -0.93
DDB1-209ENST00000537877 TRAV8-1A0A0A6YYK1 113 aa9.25□□□□□ -0.93
DDB1-209ENST00000537877 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
DDB1-209ENST00000537877 INSL3P51460 131 aa9.25□□□□□ -0.93
DDB1-209ENST00000537877 ATRQ13535 2644 aa9.25□□□□□ -0.93
DDB1-209ENST00000537877 PGPEP1LA6NFU8 196 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 IGLV2-8P01709 118 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 ZNF688P0C7X2 276 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 PSMG4Q5JS54 123 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 TMEM78Q5T7P6 136 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 C9orf66Q5T8R8 295 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 C9orf47Q6ZRZ4 202 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 PRNTQ86SH4 94 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 OCC1Q8TAD7 63 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 ISOC2Q96AB3 205 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 MCRIP2Q9BUT9 160 aaKnown RBP9.24□□□□□ -0.93
DDB1-209ENST00000537877 BIN3Q9NQY0 253 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 PPP1R14DQ9NXH3 145 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 A0A087WWC5 75 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 C7orf77A4D0Y5 90 aa9.24□□□□□ -0.93
DDB1-209ENST00000537877 NPIPB6E9PJ23 425 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms