RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 FAM122CQ6P4D5 195 aa13.08□□□□□ -0.32
CCDC61-201ENST00000536603 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
CCDC61-201ENST00000536603 FAM167A-AS1Q96KT0 104 aa13.08□□□□□ -0.32
CCDC61-201ENST00000536603 HRH4Q9H3N8 390 aa13.08□□□□□ -0.32
CCDC61-201ENST00000536603 FXYD7P58549 80 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 PSG3Q16557 428 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 FAM74A1Q5RGS3 127 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 CSNK1G2-AS1Q8NCQ2 148 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF738Q8NE65 137 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 SLC25A2Q9BXI2 301 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF331Q9NQX6 463 aaPredicted RBP13.07□□□□□ -0.32
CCDC61-201ENST00000536603 XCL2Q9UBD3 114 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 FUT9Q9Y231 359 aa13.07□□□□□ -0.32
CCDC61-201ENST00000536603 HMGB3O15347 200 aaKnown RBP13.06□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF705DP0CH99 300 aaPredicted RBP13.06□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF705BP0CI00 300 aaPredicted RBP13.06□□□□□ -0.32
CCDC61-201ENST00000536603 AKR1C8PQ5T2L2 129 aa13.06□□□□□ -0.32
CCDC61-201ENST00000536603 ALKAL2Q6UX46 152 aa13.06□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF503Q96F45 646 aa13.06□□□□□ -0.32
CCDC61-201ENST00000536603 CLUHP3Q96NS8 147 aa13.06□□□□□ -0.32
CCDC61-201ENST00000536603 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
CCDC61-201ENST00000536603 C1QTNF4Q9BXJ3 329 aa13.06□□□□□ -0.32
CCDC61-201ENST00000536603 SLC17A3O00476 420 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 MBP02144 154 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 PRB4P10163 310 aaPredicted RBP13.05□□□□□ -0.32
CCDC61-201ENST00000536603 RHOBP62745 196 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 PSG9Q00887 426 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 RAB24Q969Q5 203 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
CCDC61-201ENST00000536603 KRTAP17-1Q9BYP8 105 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 SLC35B3Q9H1N7 401 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF586Q9NXT0 402 aa13.05□□□□□ -0.32
CCDC61-201ENST00000536603 NUPR2A6NF83 97 aa13.04□□□□□ -0.32
CCDC61-201ENST00000536603 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
CCDC61-201ENST00000536603 PYYP10082 97 aa13.04□□□□□ -0.32
CCDC61-201ENST00000536603 CNN1P51911 297 aaKnown RBP13.04□□□□□ -0.32
CCDC61-201ENST00000536603 GUK1Q16774 197 aa13.04□□□□□ -0.32
CCDC61-201ENST00000536603 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
CCDC61-201ENST00000536603 MRPL32Q9BYC8 188 aaKnown RBP13.04□□□□□ -0.32
CCDC61-201ENST00000536603 TMEM14CQ9P0S9 112 aa13.04□□□□□ -0.32
CCDC61-201ENST00000536603 ALMS1Q8TCU4 4167 aa13.04□□□□□ -0.32
CCDC61-201ENST00000536603 ZNF705FA8MVS1 300 aaPredicted RBP13.03□□□□□ -0.32
CCDC61-201ENST00000536603 HIST1H1EP10412 219 aaKnown RBP13.03□□□□□ -0.32
CCDC61-201ENST00000536603 CDC34P49427 236 aaPredicted RBP13.03□□□□□ -0.32
CCDC61-201ENST00000536603 SULT1A2P50226 295 aa13.03□□□□□ -0.32
CCDC61-201ENST00000536603 PHYHIPLQ96FC7 376 aa13.03□□□□□ -0.32
CCDC61-201ENST00000536603 ACTR3CQ9C0K3 210 aaPredicted RBP13.03□□□□□ -0.32
CCDC61-201ENST00000536603 PLECQ15149 4684 aaKnown RBP13.03□□□□□ -0.32
CCDC61-201ENST00000536603 TRBV19A0A075B6N1 114 aa13.02□□□□□ -0.33
CCDC61-201ENST00000536603 ZNF705EA8MWA4 302 aaPredicted RBP13.02□□□□□ -0.33
CCDC61-201ENST00000536603 UMAD1C9J7I0 102 aa13.02□□□□□ -0.33
CCDC61-201ENST00000536603 DEFB4AO15263 64 aa13.02□□□□□ -0.33
CCDC61-201ENST00000536603 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.33
CCDC61-201ENST00000536603 OR8A1Q8NGG7 326 aa13.02□□□□□ -0.33
CCDC61-201ENST00000536603 FAM213BQ8TBF2 198 aa13.02□□□□□ -0.33
CCDC61-201ENST00000536603 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
CCDC61-201ENST00000536603 X6R8D5 127 aa13.02□□□□□ -0.33
CCDC61-201ENST00000536603 CTXND1A0A1B0GTU2 59 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 A0A1W2PPV4 95 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 A8MTW9 85 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 STAG3L2P0CL84 134 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 STAG3L3P0CL85 134 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 IFITM2Q01629 132 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 EIF5AL1Q6IS14 154 aaKnown RBP13.01□□□□□ -0.33
CCDC61-201ENST00000536603 TEX261Q6UWH6 196 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 AMTNQ6UX39 209 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 FXYD5Q96DB9 178 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 OR51M1Q9H341 326 aa13.01□□□□□ -0.33
CCDC61-201ENST00000536603 ZNF253O75346 499 aa13□□□□□ -0.33
CCDC61-201ENST00000536603 NDUFB4O95168 129 aa13□□□□□ -0.33
CCDC61-201ENST00000536603 ZNF680Q8NEM1 530 aa13□□□□□ -0.33
CCDC61-201ENST00000536603 PAXXQ9BUH6 204 aa13□□□□□ -0.33
CCDC61-201ENST00000536603 KLK5Q9Y337 293 aaPredicted RBP13□□□□□ -0.33
CCDC61-201ENST00000536603 IGHV4-28A0A0C4DH34 117 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 PRAC2D3DTV9 90 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 OR10J4P0C629 311 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 NBEAP1P0C6P0 100 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 ARL14EPLP0DKL9 152 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 MIFP14174 115 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 FGF8P55075 233 aaPredicted RBP12.99□□□□□ -0.33
CCDC61-201ENST00000536603 PDE6HQ13956 83 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 SPINK13Q1W4C9 94 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 CEMP1Q6PRD7 247 aaPredicted RBP12.99□□□□□ -0.33
CCDC61-201ENST00000536603 Q8NAQ8 132 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 MBD3L1Q8WWY6 194 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 C11orf68Q9H3H3 251 aaKnown RBP12.99□□□□□ -0.33
CCDC61-201ENST00000536603 PPP1R14DQ9NXH3 145 aa12.99□□□□□ -0.33
CCDC61-201ENST00000536603 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 MAP1LC3B2A6NCE7 125 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 M0R2Z0 102 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 OR7C2O60412 319 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 RBMY1A1P0DJD3 496 aaKnown RBP12.98□□□□□ -0.33
CCDC61-201ENST00000536603 RBMY1CP0DJD4 496 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 RAB5CP51148 216 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 TAS2R45P59539 299 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 RBMY1FQ15415 496 aaKnown RBP12.98□□□□□ -0.33
CCDC61-201ENST00000536603 KHDC3LQ587J8 217 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 DPPA3Q6W0C5 159 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 ZNF705AQ6ZN79 300 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms