RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TNFAIP6P98066 277 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-216ENST00000536548 LINC01559Q495D7 138 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 PVRIGQ6DKI7 326 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF788Q6ZQV5 615 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 S100A7AQ86SG5 101 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 BOD1L2Q8IYS8 172 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 LYPD1Q8N2G4 141 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 LINC00311Q8N616 119 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 TMEM75Q8N9X5 138 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 NEU4Q8WWR8 484 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-216ENST00000536548 FNDC4Q9H6D8 234 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-216ENST00000536548 Q9UFV3 132 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 SLC25A15Q9Y619 301 aa6.19□□□□□ -1.42
CPSF7-216ENST00000536548 DYSFO75923 2080 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 IGLV3-9A0A075B6K5 115 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 SHISA9B4DS77 424 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 PPIAL4DF5H284 164 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 NDUFS8O00217 210 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 CSN3P07498 182 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 FGF6P10767 208 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 FABP2P12104 132 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 COL8A2P25067 703 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 LGALS7P47929 136 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 SSBP2P81877 361 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-216ENST00000536548 WT1-ASQ06250 92 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 KIR3DS1Q14943 382 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 TEX36Q5VZQ5 186 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 LINC00322Q6ZN03 302 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF493Q6ZR52 646 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 NEGR1Q7Z3B1 354 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 LRRC75A-AS1Q8N1F1 130 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 C9orf106Q8NAJ2 232 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 CCL13Q99616 98 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 NPFFR1Q9GZQ6 430 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 USF3Q68DE3 2245 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 CR1P17927 2039 aa6.18□□□□□ -1.42
CPSF7-216ENST00000536548 SERTM2A0A1B0GWG4 89 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 MBD3L4A6NDZ8 208 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-216ENST00000536548 FBLL1A6NHQ2 334 aaKnown RBP6.17□□□□□ -1.42
CPSF7-216ENST00000536548 MBD3L5A6NJ08 208 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-216ENST00000536548 H3BUT2 72 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 J3QR89 54 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 PLAUP00749 431 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 HBDP02042 147 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 RPL27AP46776 148 aaKnown RBP6.17□□□□□ -1.42
CPSF7-216ENST00000536548 TIMM23BQ5SRD1 257 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 UTF1Q5T230 341 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 PRSS57Q6UWY2 283 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 PRNTQ86SH4 94 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 TMEM116Q8NCL8 245 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 LINC01560Q8TB33 94 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 SRSF12Q8WXF0 261 aaKnown RBP6.17□□□□□ -1.42
CPSF7-216ENST00000536548 RABAC1Q9UI14 185 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 SPCS1Q9Y6A9 102 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 U3KQK5 164 aa6.17□□□□□ -1.42
CPSF7-216ENST00000536548 A0A1W2PPI3 338 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 A0A1W2PPM0 123 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 CGB1A6NKQ9 187 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 M0R1B8 84 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 THBDP07204 575 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 TNFRSF1AP19438 455 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF138P52744 262 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 PLGLAQ15195 96 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 ASPHD1Q5U4P2 390 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 GOLT1AQ6ZVE7 132 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 ORMDL3Q8N138 153 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 FAM216BQ8N7L0 139 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 OR8A1Q8NGG7 326 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF414Q96IQ9 312 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 SGK494Q96LW2 274 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 YAE1D1Q9NRH1 226 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 TP73-AS1Q9UF72 201 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 TIMM8BQ9Y5J9 83 aaPredicted RBP6.16□□□□□ -1.42
CPSF7-216ENST00000536548 FAM215AQ9Y5M1 114 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 ARHGAP21Q5T5U3 1957 aa6.16□□□□□ -1.42
CPSF7-216ENST00000536548 DSCAMO60469 2012 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 ZNF207O43670 478 aaKnown RBP6.15□□□□□ -1.42
CPSF7-216ENST00000536548 SAP30O75446 220 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 IGLV2-23P01705 113 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 IGHV1-46P01743 117 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 ARMS2P0C7Q2 107 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 HLA-DRB4P13762 266 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 TMEM11P17152 192 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 PSG3Q16557 428 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 SAMD13Q5VXD3 122 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 DEFB108BQ8NET1 73 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 IFI27L1Q96BM0 104 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 PRELID3AQ96N28 172 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 JMJD8Q96S16 334 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 SRSF8Q9BRL6 282 aaKnown RBP6.15□□□□□ -1.42
CPSF7-216ENST00000536548 SLC25A39Q9BZJ4 359 aaPredicted RBP6.15□□□□□ -1.42
CPSF7-216ENST00000536548 NGBQ9NPG2 151 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 THYN1Q9P016 225 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.42
CPSF7-216ENST00000536548 PSG8Q9UQ74 426 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 HLA-DRB4X5D2U9 266 aa6.15□□□□□ -1.42
CPSF7-216ENST00000536548 DOCK11Q5JSL3 2073 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms