RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 BEAN1Q3B7T3 259 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 MED9Q9NWA0 146 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 CLEC5AQ9NY25 188 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 RPH3ALQ9UNE2 315 aa8.59□□□□□ -1.03
CDCA3-206ENST00000536241 RAB19A4D1S5 217 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 C9JQL5 133 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 PRAC2D3DTV9 90 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 G3V4G9 280 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 TAGLN2P37802 199 aaKnown RBP8.58□□□□□ -1.04
CDCA3-206ENST00000536241 CSN1S1P47710 185 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 PEA15Q15121 130 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 SAMD13Q5VXD3 122 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 COMMD7Q86VX2 200 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 C5orf17Q8NAS9 161 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 ZNF738Q8NE65 137 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 RPUSD4Q96CM3 377 aaKnown RBP8.58□□□□□ -1.04
CDCA3-206ENST00000536241 TXNDC17Q9BRA2 123 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 GPR61Q9BZJ8 451 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 PRELID1Q9Y255 219 aa8.58□□□□□ -1.04
CDCA3-206ENST00000536241 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 F6UB75 175 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 ZNF705DP0CH99 300 aaPredicted RBP8.57□□□□□ -1.04
CDCA3-206ENST00000536241 ZNF705BP0CI00 300 aaPredicted RBP8.57□□□□□ -1.04
CDCA3-206ENST00000536241 ZNF124Q15973 351 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 MAP6D1Q9H9H5 199 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 SCO2A0A1W2PP80 73 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 F6UZH7 168 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 TCRAP04437 139 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
CDCA3-206ENST00000536241 KRTAP10-11P60412 298 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 ODF3L2Q3SX64 289 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 GOLT1AQ6ZVE7 132 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 APRG1Q8IVJ8 170 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 MRPL53Q96EL3 112 aaKnown RBP8.57□□□□□ -1.04
CDCA3-206ENST00000536241 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 LINC00479Q96M42 142 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 TREM1Q9NP99 234 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 C19orf73Q9NVV2 129 aa8.57□□□□□ -1.04
CDCA3-206ENST00000536241 IGKV2-40A0A087WW87 121 aaPredicted RBP8.56□□□□□ -1.04
CDCA3-206ENST00000536241 KNCNA6PVL3 124 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 PEX7O00628 323 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 PDE6DO43924 150 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 IGKV2D-40P01614 121 aaPredicted RBP8.56□□□□□ -1.04
CDCA3-206ENST00000536241 CEBPGP53567 150 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
CDCA3-206ENST00000536241 ERCC8Q13216 396 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 SAMD5Q5TGI4 173 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 GDF5OSQ5U4N7 250 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 ARL6IP6Q8N6S5 226 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 HIST1H2BAQ96A08 127 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 VGLL1Q99990 258 aa8.56□□□□□ -1.04
CDCA3-206ENST00000536241 AGRNO00468 2067 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 TRAV8-1A0A0A6YYK1 113 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 TRAV34A0A0B4J273 112 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 OR11H12B2RN74 326 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 EGFEM1PQ0D2K5 195 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 OR8A1Q8NGG7 326 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 ATG101Q9BSB4 218 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 SMDT1Q9H4I9 107 aa8.55□□□□□ -1.04
CDCA3-206ENST00000536241 A0A0J9YX75 114 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 TMEM250H0YL14 139 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 HIST1H1AQ02539 215 aaPredicted RBP8.54□□□□□ -1.04
CDCA3-206ENST00000536241 ACTL10Q5JWF8 245 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 EBLN2Q6P2I7 272 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 GTSCR1Q86UQ5 136 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 Q8N1Y9 231 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 EIF4E3Q8N5X7 224 aaKnown RBP8.54□□□□□ -1.04
CDCA3-206ENST00000536241 CYB561D1Q8N8Q1 229 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 C2CD4CQ8TF44 421 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 CITED4Q96RK1 184 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 PRR25Q96S07 402 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 ASCL2Q99929 193 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 FAM110AQ9BQ89 295 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 TCEAL7Q9BRU2 100 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 AGPAT4-IT1Q9H0P7 198 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 SLC35B3Q9H1N7 401 aa8.54□□□□□ -1.04
CDCA3-206ENST00000536241 SAV1Q9H4B6 383 aaPredicted RBP8.54□□□□□ -1.04
CDCA3-206ENST00000536241 RBAKDNA6NC62 111 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 K7EQM0 130 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 IGKV3-20P01619 116 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 AKR1C3P42330 323 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 UQCC3Q6UW78 93 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 FOXI2Q6ZQN5 318 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 DEFB125Q8N687 156 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 OR4B1Q8NGF8 309 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 OR10J6PQ8NGY7 276 aa8.53□□□□□ -1.04
CDCA3-206ENST00000536241 SERTM2A0A1B0GWG4 89 aa8.52□□□□□ -1.05
CDCA3-206ENST00000536241 H3BMM0 161 aa8.52□□□□□ -1.05
CDCA3-206ENST00000536241 NDUFS6O75380 124 aaKnown RBP8.52□□□□□ -1.05
CDCA3-206ENST00000536241 CNN1P51911 297 aaKnown RBP8.52□□□□□ -1.05
CDCA3-206ENST00000536241 FLI1Q01543 452 aaPredicted RBP8.52□□□□□ -1.05
CDCA3-206ENST00000536241 NDUFA5Q16718 116 aa8.52□□□□□ -1.05
CDCA3-206ENST00000536241 TMEM183BQ1AE95 376 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms