RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 C1orf134Q5TEV5 83 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 NRARPQ7Z6K4 114 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 C12orf45Q8N5I9 185 aaPredicted RBP9.25□□□□□ -0.93
RTN3-207ENST00000536011 TMEM37Q8WXS4 190 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 C2orf50Q96LR7 162 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 CCDC32Q9BV29 185 aa9.25□□□□□ -0.93
RTN3-207ENST00000536011 PLAC8L1A1L4L8 177 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 PLA2G10O15496 165 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 CST7O76096 145 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 NUDT3O95989 172 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 PRM2P04554 102 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 IGLC2P0DOY2 106 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 S100A11P31949 105 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 LEPP41159 167 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 CCL18P55774 89 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 S100A10P60903 97 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
RTN3-207ENST00000536011 ODF3Q96PU9 254 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 WDR83OSQ9Y284 106 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 PCLOQ9Y6V0 5065 aa9.24□□□□□ -0.93
RTN3-207ENST00000536011 PKD1P98161 4303 aa9.23□□□□□ -0.93
RTN3-207ENST00000536011 ZNF253O75346 499 aa9.23□□□□□ -0.93
RTN3-207ENST00000536011 RPL29P47914 159 aaKnown RBP9.23□□□□□ -0.93
RTN3-207ENST00000536011 SULT1A1P50225 295 aa9.23□□□□□ -0.93
RTN3-207ENST00000536011 BAXQ07812 192 aa9.23□□□□□ -0.93
RTN3-207ENST00000536011 VWC2Q2TAL6 325 aa9.23□□□□□ -0.93
RTN3-207ENST00000536011 SEC22CQ9BRL7 303 aa9.23□□□□□ -0.93
RTN3-207ENST00000536011 NOP10Q9NPE3 64 aaKnown RBP9.23□□□□□ -0.93
RTN3-207ENST00000536011 LYRM2Q9NU23 88 aaPredicted RBP9.23□□□□□ -0.93
RTN3-207ENST00000536011 LOC100996750A0A140TA64 210 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 UBE2L5PA0A1B0GUS4 154 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 FAM240BA0A1B0GVZ2 78 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 SLC17A3O00476 420 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 MPDU1O75352 247 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 SNRPCP09234 159 aaKnown RBP9.22□□□□□ -0.93
RTN3-207ENST00000536011 H2AFB2P0C5Z0 115 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 CLINT1Q14677 625 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 FCN2Q15485 313 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 ATP6V1FQ16864 119 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 MIC13Q5XKP0 118 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
RTN3-207ENST00000536011 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 SLC39A9Q9NUM3 307 aa9.22□□□□□ -0.93
RTN3-207ENST00000536011 NACAE9PAV3 2078 aa9.21□□□□□ -0.93
RTN3-207ENST00000536011 FAM24AA6NFZ4 105 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 NPIPB6E9PJ23 425 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 H3BQ15 152 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 H3BTX0 84 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 RLN2P04090 185 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 MORN5Q5VZ52 161 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 LINC00299Q6ZSB3 139 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 CHAC2Q8WUX2 184 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 SAT2Q96F10 170 aaPredicted RBP9.21□□□□□ -0.94
RTN3-207ENST00000536011 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 PRELID1Q9Y255 219 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 DNAH11Q96DT5 4516 aa9.21□□□□□ -0.94
RTN3-207ENST00000536011 NBDYA0A0U1RRE5 68 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 PRAC2D3DTV9 90 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 M6PRP20645 277 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 FGF7P21781 194 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 PDE6HQ13956 83 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 TMEM252Q8N6L7 170 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 ZNRF2Q8NHG8 242 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 C11orf1Q9H5F2 150 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 GPN1Q9HCN4 374 aaPredicted RBP9.2□□□□□ -0.94
RTN3-207ENST00000536011 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 TMEM14CQ9P0S9 112 aa9.2□□□□□ -0.94
RTN3-207ENST00000536011 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 IGSF23A1L1A6 192 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 SLC25A5P05141 298 aaKnown RBP9.19□□□□□ -0.94
RTN3-207ENST00000536011 PRB4P10163 310 aaPredicted RBP9.19□□□□□ -0.94
RTN3-207ENST00000536011 OR5I1Q13606 314 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 RAB32Q13637 225 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 ZNF680Q8NEM1 530 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 S100ZQ8WXG8 99 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 GNPNAT1Q96EK6 184 aaPredicted RBP9.19□□□□□ -0.94
RTN3-207ENST00000536011 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 ZNF586Q9NXT0 402 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 TIMM9Q9Y5J7 89 aa9.19□□□□□ -0.94
RTN3-207ENST00000536011 TRAV5A0A0B4J249 113 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 TRAV12-3A0A0B4J271 114 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 J3KRW8 73 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 CT45A10P0DMU9 189 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 HIST1H1EP10412 219 aaKnown RBP9.18□□□□□ -0.94
RTN3-207ENST00000536011 TNP2Q05952 138 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 DAZ2Q13117 558 aaKnown RBP9.18□□□□□ -0.94
RTN3-207ENST00000536011 TTC32Q5I0X7 151 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 C6orf223Q8N319 242 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 LINC00612Q8N6U2 182 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 PARD6GQ9BYG4 376 aaPredicted RBP9.18□□□□□ -0.94
RTN3-207ENST00000536011 SLC25A31Q9H0C2 315 aa9.18□□□□□ -0.94
RTN3-207ENST00000536011 DYNC1H1Q14204 4646 aaKnown RBP9.17□□□□□ -0.94
RTN3-207ENST00000536011 TRAV26-1A0A087WT03 109 aa9.17□□□□□ -0.94
RTN3-207ENST00000536011 GAGE12BA1L429 117 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms