RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LYNX1P0DP58 116 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 GNG5P63218 68 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 LINC00322Q6ZN03 302 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-203ENST00000535977 OR4X2Q8NGF9 303 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 SRSF12Q8WXF0 261 aaKnown RBP14.18□□□□□ -0.14
RAB40C-203ENST00000535977 MRAP2Q96G30 205 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 FMC1Q96HJ9 113 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 C18orf15Q96N68 181 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 RPP21Q9H633 154 aaKnown RBP14.18□□□□□ -0.14
RAB40C-203ENST00000535977 HIGD1AQ9Y241 93 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 PKDREJQ9NTG1 2253 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 CCL21O00585 134 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 CHEK1O14757 476 aa14.18□□□□□ -0.14
RAB40C-203ENST00000535977 CACNA1BQ00975 2339 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 A8MWL6 223 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 SMIM13P0DJ93 91 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 COX7A1P24310 79 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 WFDC2Q14508 124 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 VGLL1Q99990 258 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 FBXL15Q9H469 300 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 TMEM14CQ9P0S9 112 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 ITPR1Q14643 2758 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 APOHP02749 345 aaPredicted RBP14.17□□□□□ -0.14
RAB40C-203ENST00000535977 PLGLAQ15195 96 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 OR11H6Q8NGC7 330 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 ATRXP46100 2492 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 POLEQ07864 2286 aa14.17□□□□□ -0.14
RAB40C-203ENST00000535977 J3QR89 54 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 GP9P14770 177 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 SPAG8Q99932 426 aaPredicted RBP14.16□□□□□ -0.14
RAB40C-203ENST00000535977 AP5S1Q9NUS5 200 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 DPM3Q9P2X0 92 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 USP24Q9UPU5 2620 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 A6NJY4 79 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 SIVA1O15304 175 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 OR8A1Q8NGG7 326 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 ONECUT1Q9UBC0 465 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 SOX21Q9Y651 276 aaPredicted RBP14.16□□□□□ -0.14
RAB40C-203ENST00000535977 ZFYVE26Q68DK2 2539 aa14.16□□□□□ -0.14
RAB40C-203ENST00000535977 I3L2K1 104 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 M0R1W7 72 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 KLRB1Q12918 225 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 PCP2Q8IVA1 136 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 CT83Q5H943 113 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 RASL11BQ9BPW5 248 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 MLST8Q9BVC4 326 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 NAV3Q8IVL0 2385 aa14.15□□□□□ -0.14
RAB40C-203ENST00000535977 MALRD1Q5VYJ5 2156 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 SH2D6Q7Z4S9 175 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 OTORQ9NRC9 128 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 ZNF492Q9P255 531 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 K7ERJ3 54 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 CNIH1O95406 144 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 ATP5G2Q06055 141 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 RUSC1-AS1Q66K80 236 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 Q9H3A6 140 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 SPTA1P02549 2419 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 SERTM2A0A1B0GWG4 89 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 RBPMS2Q6ZRY4 209 aaKnown RBP14.14□□□□□ -0.15
RAB40C-203ENST00000535977 PRSS22Q9GZN4 317 aa14.14□□□□□ -0.15
RAB40C-203ENST00000535977 CSN1S1P47710 185 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 FXYD2P54710 66 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 NPBQ8NG41 125 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 TIMM23O14925 209 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 LTAP01374 205 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 P01737 135 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 TCRAP04437 139 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 GCSHP23434 173 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 NMUP48645 174 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 DLX1P56177 255 aa14.13□□□□□ -0.15
RAB40C-203ENST00000535977 NBR2O15453 112 aa14.12□□□□□ -0.15
RAB40C-203ENST00000535977 APELAP0DMC3 54 aa14.12□□□□□ -0.15
RAB40C-203ENST00000535977 LYZP61626 148 aa14.12□□□□□ -0.15
RAB40C-203ENST00000535977 ETDBQ3ZM63 59 aa14.12□□□□□ -0.15
RAB40C-203ENST00000535977 ARPC1AQ92747 370 aa14.12□□□□□ -0.15
RAB40C-203ENST00000535977 SLC25A39Q9BZJ4 359 aaPredicted RBP14.12□□□□□ -0.15
RAB40C-203ENST00000535977 FAM106CPP0CH98 169 aa14.12□□□□□ -0.15
RAB40C-203ENST00000535977 GRNP28799 593 aaKnown RBP14.12□□□□□ -0.15
RAB40C-203ENST00000535977 FAM106AQ4KMX7 169 aa14.12□□□□□ -0.15
RAB40C-203ENST00000535977 PLXNB1O43157 2135 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 IGHV3-21A0A0B4J1V1 117 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 TRBV6-1A0A0K0K1D8 114 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 F8W1H4 67 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 NDUFA3O95167 84 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 C1orf122Q6ZSJ8 110 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 GFRA4Q9GZZ7 299 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 BSNQ9UPA5 3926 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 PRTN3P24158 256 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 CACNG7P62955 275 aa14.11□□□□□ -0.15
RAB40C-203ENST00000535977 DAZAP1Q96EP5 407 aaKnown RBP14.11□□□□□ -0.15
RAB40C-203ENST00000535977 A0A096LNJ9 63 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 BCL6BQ8N143 479 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-203ENST00000535977 PRSS3P2Q8NHM4 247 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 TLN1Q9Y490 2541 aaKnown RBP14.1□□□□□ -0.15
RAB40C-203ENST00000535977 A0A1W2PRD5 423 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 A0A1W2PRF3 423 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 A0A1W2PRM7 423 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 C19orf71A6NCJ1 209 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 INSL3P51460 131 aa14.1□□□□□ -0.15
RAB40C-203ENST00000535977 LOXL1Q08397 574 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms