RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 KNCNA6PVL3 124 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 SLC17A3O00476 420 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 PYYP10082 97 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
DDB1-207ENST00000535967 PSG9Q00887 426 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 PSG3Q16557 428 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 EBLN2Q6P2I7 272 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 FAM122CQ6P4D5 195 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 PQLC2Q6ZP29 291 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 SAT2Q96F10 170 aaPredicted RBP9.31□□□□□ -0.92
DDB1-207ENST00000535967 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 PAXXQ9BUH6 204 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 ZNF471Q9BX82 626 aaPredicted RBP9.31□□□□□ -0.92
DDB1-207ENST00000535967 ZNF586Q9NXT0 402 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 A0A0J9YX75 114 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 H3BMM0 161 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 C4BPBP20851 252 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 UBE2L3P68036 154 aaKnown RBP9.31□□□□□ -0.92
DDB1-207ENST00000535967 ZFP69Q49AA0 526 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 AKR1C8PQ5T2L2 129 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 Q6ZWC4 215 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 ZNF738Q8NE65 137 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 STOML3Q8TAV4 291 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 FXYD5Q96DB9 178 aa9.31□□□□□ -0.92
DDB1-207ENST00000535967 MRPL53Q96EL3 112 aaKnown RBP9.31□□□□□ -0.92
DDB1-207ENST00000535967 A8MTW9 85 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 H3BS24 57 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
DDB1-207ENST00000535967 NBEAP1P0C6P0 100 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 SEC11BP0C7V7 166 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 TPT1P13693 172 aaKnown RBP9.3□□□□□ -0.92
DDB1-207ENST00000535967 NUTF2P61970 127 aaKnown RBP9.3□□□□□ -0.92
DDB1-207ENST00000535967 RPP25LQ8N5L8 163 aaKnown RBP9.3□□□□□ -0.92
DDB1-207ENST00000535967 RNF141Q8WVD5 230 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 KRTAP17-1Q9BYP8 105 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 ACTR3CQ9C0K3 210 aaPredicted RBP9.3□□□□□ -0.92
DDB1-207ENST00000535967 CSTL1Q9H114 145 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 AAMDCQ9H7C9 122 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 PRELID1Q9Y255 219 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 TP53TG1Q9Y2A0 90 aa9.3□□□□□ -0.92
DDB1-207ENST00000535967 H3BTX0 84 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 NDUFB4O95168 129 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 OR10J4P0C629 311 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 STAG3L2P0CL84 134 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 STAG3L3P0CL85 134 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 LGALSLQ3ZCW2 172 aaPredicted RBP9.29□□□□□ -0.92
DDB1-207ENST00000535967 GDF5OSQ5U4N7 250 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 IGFL4Q6B9Z1 124 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 BAP18Q8IXM2 172 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 LYPD1Q8N2G4 141 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 BLNKQ8WV28 456 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 RAB24Q969Q5 203 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 ZNF503Q96F45 646 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 C1QTNF4Q9BXJ3 329 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 EDA2RQ9HAV5 297 aa9.29□□□□□ -0.92
DDB1-207ENST00000535967 CTXND1A0A1B0GTU2 59 aa9.28□□□□□ -0.92
DDB1-207ENST00000535967 UMAD1C9J7I0 102 aa9.28□□□□□ -0.92
DDB1-207ENST00000535967 F6UB75 175 aa9.28□□□□□ -0.92
DDB1-207ENST00000535967 CA1P00915 261 aaPredicted RBP9.28□□□□□ -0.92
DDB1-207ENST00000535967 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
DDB1-207ENST00000535967 HLA-DMBP28068 263 aa9.28□□□□□ -0.92
DDB1-207ENST00000535967 CD300CQ08708 224 aa9.28□□□□□ -0.92
DDB1-207ENST00000535967 RPUSD4Q96CM3 377 aaKnown RBP9.28□□□□□ -0.92
DDB1-207ENST00000535967 CXorf1O96002 111 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 ARL14EPLP0DKL9 152 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 DEFB1P60022 68 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 DEFB135Q30KP9 77 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 EIF5AL1Q6IS14 154 aaKnown RBP9.27□□□□□ -0.93
DDB1-207ENST00000535967 C9orf62Q8N4C0 152 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 OR4B1Q8NGF8 309 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 PHYHIPLQ96FC7 376 aa9.27□□□□□ -0.93
DDB1-207ENST00000535967 AMBPP02760 352 aa9.26□□□□□ -0.93
DDB1-207ENST00000535967 CNN1P51911 297 aaKnown RBP9.26□□□□□ -0.93
DDB1-207ENST00000535967 DPPA3Q6W0C5 159 aa9.26□□□□□ -0.93
DDB1-207ENST00000535967 SLC51BQ86UW2 128 aa9.26□□□□□ -0.93
DDB1-207ENST00000535967 RNF183Q96D59 192 aa9.26□□□□□ -0.93
DDB1-207ENST00000535967 RETNQ9HD89 108 aa9.26□□□□□ -0.93
DDB1-207ENST00000535967 TMEM167BQ9NRX6 74 aa9.26□□□□□ -0.93
DDB1-207ENST00000535967 PLECQ15149 4684 aaKnown RBP9.26□□□□□ -0.93
DDB1-207ENST00000535967 ALMS1Q8TCU4 4167 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 SPRY2O43597 315 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 GCHFRP30047 84 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 HIST1H1AQ02539 215 aaPredicted RBP9.25□□□□□ -0.93
DDB1-207ENST00000535967 ICAM4Q14773 271 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 ZNF726P1Q15940 193 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 FAM74A1Q5RGS3 127 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 OR10J6PQ8NGY7 276 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 SUN5Q8TC36 379 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 Q9H3A6 140 aa9.25□□□□□ -0.93
DDB1-207ENST00000535967 NPIPB6E9PJ23 425 aa9.24□□□□□ -0.93
DDB1-207ENST00000535967 HMGB3O15347 200 aaKnown RBP9.24□□□□□ -0.93
DDB1-207ENST00000535967 EIF3GO75821 320 aaKnown RBP eCLIP9.24□□□□□ -0.93
DDB1-207ENST00000535967 IGKV3-20P01619 116 aa9.24□□□□□ -0.93
DDB1-207ENST00000535967 GIG44P09565 113 aaPredicted RBP9.24□□□□□ -0.93
DDB1-207ENST00000535967 AMTNQ6UX39 209 aa9.24□□□□□ -0.93
DDB1-207ENST00000535967 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms