RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 IGKV3-20P01619 116 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 FXYD7P58549 80 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 MORN5Q5VZ52 161 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 FAM122CQ6P4D5 195 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 CEMP1Q6PRD7 247 aaPredicted RBP11.84□□□□□ -0.51
ATL3-202ENST00000535789 FOXI2Q6ZQN5 318 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 FAM213BQ8TBF2 198 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 HIGD1AQ9Y241 93 aa11.84□□□□□ -0.51
ATL3-202ENST00000535789 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
ATL3-202ENST00000535789 GALR1P47211 349 aa11.83□□□□□ -0.52
ATL3-202ENST00000535789 CDC34P49427 236 aaPredicted RBP11.83□□□□□ -0.52
ATL3-202ENST00000535789 RNF182Q8N6D2 247 aa11.83□□□□□ -0.52
ATL3-202ENST00000535789 MRPL32Q9BYC8 188 aaKnown RBP11.83□□□□□ -0.52
ATL3-202ENST00000535789 SLC35B3Q9H1N7 401 aa11.83□□□□□ -0.52
ATL3-202ENST00000535789 FUT9Q9Y231 359 aa11.83□□□□□ -0.52
ATL3-202ENST00000535789 A0A0J9YX75 114 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 CTXND1A0A1B0GTU2 59 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 A8MTW9 85 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 EIF3GO75821 320 aaKnown RBP eCLIP11.82□□□□□ -0.52
ATL3-202ENST00000535789 NMBP08949 121 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 PRB4P10163 310 aaPredicted RBP11.82□□□□□ -0.52
ATL3-202ENST00000535789 HLA-DMBP28068 263 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 ID1P41134 155 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 RHOBP62745 196 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 MIR17HGQ75NE6 70 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 LINC00305Q7Z4B0 112 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 PHLDA1Q8WV24 401 aaPredicted RBP11.82□□□□□ -0.52
ATL3-202ENST00000535789 PCNPQ8WW12 178 aaKnown RBP11.82□□□□□ -0.52
ATL3-202ENST00000535789 LINC00476Q8WZB0 136 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 RAB24Q969Q5 203 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 SAT2Q96F10 170 aaPredicted RBP11.82□□□□□ -0.52
ATL3-202ENST00000535789 C16orf92Q96LL3 132 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 ACTR3CQ9C0K3 210 aaPredicted RBP11.82□□□□□ -0.52
ATL3-202ENST00000535789 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
ATL3-202ENST00000535789 A0A087X0K7 114 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 MIFP14174 115 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 MEOX2P50222 304 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 ZNF705AQ6ZN79 300 aaPredicted RBP11.81□□□□□ -0.52
ATL3-202ENST00000535789 C11orf45Q8TAV5 145 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 LRRC20Q8TCA0 184 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 MBD3L1Q8WWY6 194 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 FAM167A-AS1Q96KT0 104 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 CLUHP3Q96NS8 147 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
ATL3-202ENST00000535789 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 A0A1W2PPV4 95 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 STAG3L2P0CL84 134 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 STAG3L3P0CL85 134 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 BLOC1S1P78537 153 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 OR4B1Q8NGF8 309 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 GPR82Q96P67 336 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 SLC25A2Q9BXI2 301 aa11.8□□□□□ -0.52
ATL3-202ENST00000535789 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
ATL3-202ENST00000535789 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
ATL3-202ENST00000535789 HMGB3O15347 200 aaKnown RBP11.79□□□□□ -0.52
ATL3-202ENST00000535789 H2AFB1P0C5Y9 115 aa11.79□□□□□ -0.52
ATL3-202ENST00000535789 ZNF705DP0CH99 300 aaPredicted RBP11.79□□□□□ -0.52
ATL3-202ENST00000535789 ZNF705BP0CI00 300 aaPredicted RBP11.79□□□□□ -0.52
ATL3-202ENST00000535789 CLLU1Q5K131 121 aa11.79□□□□□ -0.52
ATL3-202ENST00000535789 LYPD6BQ8NI32 183 aa11.79□□□□□ -0.52
ATL3-202ENST00000535789 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
ATL3-202ENST00000535789 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
ATL3-202ENST00000535789 TRAV1-1A0A0B4J248 108 aa11.78□□□□□ -0.52
ATL3-202ENST00000535789 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
ATL3-202ENST00000535789 RPL7P18124 248 aaKnown RBP11.78□□□□□ -0.52
ATL3-202ENST00000535789 KHDC3LQ587J8 217 aa11.78□□□□□ -0.52
ATL3-202ENST00000535789 LCN15Q6UWW0 184 aa11.78□□□□□ -0.52
ATL3-202ENST00000535789 S100A7AQ86SG5 101 aa11.78□□□□□ -0.52
ATL3-202ENST00000535789 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
ATL3-202ENST00000535789 C1QTNF4Q9BXJ3 329 aa11.78□□□□□ -0.52
ATL3-202ENST00000535789 SLC17A3O00476 420 aa11.77□□□□□ -0.53
ATL3-202ENST00000535789 ARL14EPLP0DKL9 152 aa11.77□□□□□ -0.53
ATL3-202ENST00000535789 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
ATL3-202ENST00000535789 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.53
ATL3-202ENST00000535789 TAS2R45P59539 299 aa11.77□□□□□ -0.53
ATL3-202ENST00000535789 NUTF2P61970 127 aaKnown RBP11.77□□□□□ -0.53
ATL3-202ENST00000535789 SAMD13Q5VXD3 122 aa11.77□□□□□ -0.53
ATL3-202ENST00000535789 Q6ZTC4 211 aa11.77□□□□□ -0.53
ATL3-202ENST00000535789 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.53
ATL3-202ENST00000535789 HRH4Q9H3N8 390 aa11.77□□□□□ -0.53
ATL3-202ENST00000535789 H3BTX0 84 aa11.76□□□□□ -0.53
ATL3-202ENST00000535789 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
ATL3-202ENST00000535789 S100A7P31151 101 aa11.76□□□□□ -0.53
ATL3-202ENST00000535789 PSG9Q00887 426 aa11.76□□□□□ -0.53
ATL3-202ENST00000535789 PQLC2Q6ZP29 291 aa11.76□□□□□ -0.53
ATL3-202ENST00000535789 TMEM14CQ9P0S9 112 aa11.76□□□□□ -0.53
ATL3-202ENST00000535789 A0A1B0GV50 99 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 CXorf1O96002 111 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 HBE1P02100 147 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 PYYP10082 97 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 RAB14P61106 215 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 EBLN2Q6P2I7 272 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 NEU1Q99519 415 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 BIRC6Q9NR09 4857 aa11.75□□□□□ -0.53
ATL3-202ENST00000535789 IGHV3OR16-12A0A075B7B8 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms