RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 HTN3P15516 51 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 S100A11P31949 105 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 RPL29P47914 159 aaKnown RBP7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 CAMLGP49069 296 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 SULT1A1P50225 295 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 RHOBP62745 196 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 FCN2Q15485 313 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 TMEM252Q8N6L7 170 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 C15orf53Q8NAA6 179 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 LRRC20Q8TCA0 184 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 RNASE8Q8TDE3 154 aaKnown RBP7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 LINC01587Q99440 93 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 C20orf144Q9BQM9 153 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 PXMP4Q9Y6I8 212 aa7.06□□□□□ -1.28
CLSTN3-203ENST00000534830 TRAV5A0A0B4J249 113 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 IGSF23A1L1A6 192 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 CBY3A6NI87 242 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 ZNF253O75346 499 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 INAFM2P0DMQ5 153 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 BCAP31P51572 246 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 CAV2P51636 162 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 FAM3BP58499 235 aaPredicted RBP7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 RAB31Q13636 194 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 RAB32Q13637 225 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 ZNF493Q6ZR52 646 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 Q6ZRG5 221 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 LINC00612Q8N6U2 182 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 OR1L4Q8NGR5 311 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 ODF3Q96PU9 254 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 UQCC1Q9NVA1 299 aa7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 TIMM8BQ9Y5J9 83 aaPredicted RBP7.05□□□□□ -1.28
CLSTN3-203ENST00000534830 FAM240BA0A1B0GVZ2 78 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 H3BTX0 84 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 H7BYZ3 331 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 CT45A10P0DMU9 189 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 DEFB130BP0DP73 79 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 DEFB130AP0DP74 79 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 PVALBP20472 110 aaPredicted RBP7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 ASAH1Q13510 395 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 GUK1Q16774 197 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 ATP6V1FQ16864 119 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 TMEM263Q8WUH6 116 aaKnown RBP7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 PFDN5Q99471 154 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 PARD6GQ9BYG4 376 aaPredicted RBP7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 SLC39A9Q9NUM3 307 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 PPP1R14DQ9NXH3 145 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 ZNF586Q9NXT0 402 aa7.04□□□□□ -1.28
CLSTN3-203ENST00000534830 TRBV19A0A075B6N1 114 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 ATP5G1P05496 136 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 ATP5G3P48201 142 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 GFI1BQ5VTD9 330 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 OR10J6PQ8NGY7 276 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 S100ZQ8WXG8 99 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 MRPL53Q96EL3 112 aaKnown RBP7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 TMEM14CQ9P0S9 112 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
CLSTN3-203ENST00000534830 UBE2L5PA0A1B0GUS4 154 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 F5H768 121 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 MPDU1O75352 247 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 NDUFB4O95168 129 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 S100A10P60903 97 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 HBG1P69891 147 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 HBG2P69892 147 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 IFITM3Q01628 133 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 BAXQ07812 192 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 MZT2BQ6NZ67 158 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 ZNRF2Q8NHG8 242 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 NPCDR1Q9BY65 106 aa7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 NOP10Q9NPE3 64 aaKnown RBP7.02□□□□□ -1.29
CLSTN3-203ENST00000534830 H0YIZ8 118 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 ZNF324O75467 553 aaPredicted RBP7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 UPK1BO75841 260 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 HIST1H1EP10412 219 aaKnown RBP7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 HTN1P15515 57 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 FGF7P21781 194 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 NHLH2Q02577 135 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 PDE6HQ13956 83 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 STX12Q86Y82 276 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 FAM167A-AS1Q96KT0 104 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 NMES1Q9C002 83 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 PRELID1Q9Y255 219 aa7.01□□□□□ -1.29
CLSTN3-203ENST00000534830 A6NHS1 94 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 KLLNB2CW77 178 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 M0R3E3 92 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 SIX6O95475 246 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 PYYP10082 97 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 LEPP41159 167 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 DAZ2Q13117 558 aaKnown RBP7□□□□□ -1.29
CLSTN3-203ENST00000534830 ERCC8Q13216 396 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 GCSAMLQ5JQS6 135 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 SPATA12Q7Z6I5 190 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 RNF141Q8WVD5 230 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 LINC00477Q96M19 166 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 PYGO2Q9BRQ0 406 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 LINC00467Q9BRT7 94 aa7□□□□□ -1.29
CLSTN3-203ENST00000534830 SLC25A2Q9BXI2 301 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms