RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ZNF816-ZNF321PA0A0X1KG74 233 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 IGSF23A1L1A6 192 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 TMEM212A6NML5 194 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 ZNF705FA8MVS1 300 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 E7EQL1 145 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 M0QXV9 152 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 CRXO43186 299 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 MRPL33O75394 65 aaKnown RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 IFNA1P01562 189 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 HBZP02008 142 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 ZNF705DP0CH99 300 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 ZNF705BP0CI00 300 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 PSG2P11465 335 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 IL3RAP26951 378 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 ATP6V0CP27449 155 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 SSTR5P35346 364 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 GABRA2P47869 451 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 ZNF133P52736 654 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 RPL23P62829 140 aaKnown RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 ANK2Q01484 3957 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 BSPH1Q075Z2 132 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 HSD52Q0P140 79 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 TMEM267Q0VDI3 215 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 PMCHL1Q16048 86 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 POU2AF1Q16633 256 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 HIST3H3Q16695 136 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 MPV17LQ2QL34 196 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 HLA-DRB5Q30154 266 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 DEFB113Q30KQ7 82 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 SPATA45Q537H7 98 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 C2orf83Q53S99 150 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 KLF17Q5JT82 389 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 CLEC12AQ5QGZ9 265 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 C9orf129Q5T035 196 aaKnown RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 TMEM42Q69YG0 159 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 ZNF880Q6PDB4 577 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 AAED1Q7RTV5 226 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 S100A7AQ86SG5 101 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 SGPP2Q8IWX5 399 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 TCTEX1D1Q8N7M0 179 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 WFDC11Q8NEX6 87 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 OR1N2Q8NGR9 330 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 PFN4Q8NHR9 129 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 LINC01006Q8NI28 216 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 CMTM2Q8TAZ6 248 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 PGLYRP4Q96LB8 373 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 PSMG3Q9BT73 122 aaPredicted RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 EMC6Q9BV81 110 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 PARP12Q9H0J9 701 aaKnown RBP2.38□□□□□ -2.03
USP48-215ENST00000534705 SH3BGRL3Q9H299 93 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 NPVFQ9HCQ7 196 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 MANBALQ9NQG1 85 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 MED29Q9NX70 200 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 ZNF586Q9NXT0 402 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 OR1A1Q9P1Q5 309 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 DPM3Q9P2X0 92 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 PSG8Q9UQ74 426 aa2.38□□□□□ -2.03
USP48-215ENST00000534705 HIVEP2P31629 2446 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 DUXBA0A1W2PPF3 345 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 ODAMA1E959 279 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 OR2T8A6NH00 312 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 CRYM-AS1A6NIL9 109 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 RIIAD1A6NNX1 92 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 TMEM14DPA8MWL7 114 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 C17orf112F2Z3M2 114 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 F6UB75 175 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 K7EN84 100 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 K7EP34 96 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 ENSAO43768 121 aaKnown RBP2.37□□□□□ -2.03
USP48-215ENST00000534705 MPZL1O95297 269 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 MT-CO2P00403 227 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 IGHMP01871 453 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 ORM1P02763 201 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 MAS1P04201 325 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 CECR9P0C854 216 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 ZNF728P0DKX0 622 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 HIST1H1CP16403 213 aaKnown RBP2.37□□□□□ -2.03
USP48-215ENST00000534705 ALOX5APP20292 161 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 MDKP21741 143 aaPredicted RBP2.37□□□□□ -2.03
USP48-215ENST00000534705 GALR1P47211 349 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 HINT1P49773 126 aaPredicted RBP2.37□□□□□ -2.03
USP48-215ENST00000534705 TAS2R41P59536 307 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 CKS1BP61024 79 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 SEC11AP67812 179 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 HIST1H1AQ02539 215 aaPredicted RBP2.37□□□□□ -2.03
USP48-215ENST00000534705 RPL18Q07020 188 aaKnown RBP2.37□□□□□ -2.03
USP48-215ENST00000534705 MSMO1Q15800 293 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 CEACAM16Q2WEN9 425 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 COX19Q49B96 90 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 OR10J3Q5JRS4 329 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 C10orf128Q5T292 105 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 AMMECR1LQ6DCA0 310 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 C12orf54Q6X4T0 127 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 OR5A1Q8NGJ0 315 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 OR2G3Q8NGZ4 309 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 SGMS2Q8NHU3 365 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 FAM213BQ8TBF2 198 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 C18orf32Q8TCD1 76 aa2.37□□□□□ -2.03
USP48-215ENST00000534705 OR5P3Q8WZ94 311 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms