RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TRAV34A0A0B4J273 112 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 A0A1W2PPQ1 181 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RNF222A6NCQ9 220 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 UMAD1C9J7I0 102 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 F5H768 121 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SOCS1O15524 211 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 FCGR3BO75015 233 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 PDCD6O75340 191 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 EIF3GO75821 320 aaKnown RBP eCLIP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SCGNO76038 276 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 YIF1AO95070 293 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SFT2D2O95562 160 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 DIRAS3O95661 229 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 NAPSAO96009 420 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 IFNA5P01569 189 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 CTSGP08311 255 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ZNF688P0C7X2 276 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 P0C879 139 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SLC25A4P12235 298 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 DEFA4P12838 97 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ADCYAP1P18509 176 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ZBTB25P24278 435 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RPL12P30050 165 aaKnown RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 GNRHRP30968 328 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 DUTP33316 252 aaKnown RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 LPAR6P43657 344 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RPL27AP46776 148 aaKnown RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RPS10P46783 165 aaKnown RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 CAV2P51636 162 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 CMC4P56277 68 aaPredicted RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 BRWD1-AS2P59051 145 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 LINC00315P59091 139 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 TAS2R46P59540 309 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RAB2AP61019 212 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RPL30P62888 115 aaKnown RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 CYCSP99999 105 aaKnown RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RELQ04864 619 aaPredicted RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 FABP9Q0Z7S8 132 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ZNF345Q14585 488 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 CLINT1Q14677 625 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RHEBQ15382 184 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 GUK1Q16774 197 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 KLK9Q2XQG4 91 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SP6Q3SY56 376 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 VMA21Q3ZAQ7 101 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ZNF880Q6PDB4 577 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 PRSS54Q6PEW0 395 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 MORN3Q6PF18 240 aaPredicted RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 TRAT1Q6PIZ9 186 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SSX7Q7RTT5 188 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SLC25A42Q86VD7 318 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 BAP18Q8IXM2 172 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 UBAC2Q8NBM4 344 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 HSD17B11Q8NBQ5 300 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 OR10W1Q8NGF6 305 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 OR56B1Q8NGI3 324 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SFT2D1Q8WV19 159 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 TCTEX1D2Q8WW35 142 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ASB13Q8WXK3 278 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 PTX4Q96A99 478 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ISOC2Q96AB3 205 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 PHYHIPLQ96FC7 376 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ARHGAP5-AS1Q96IT6 56 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 C2orf50Q96LR7 162 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 OR2A7Q96R45 310 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RAB40CQ96S21 281 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 PFDN5Q99471 154 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 NIPSNAP3BQ9BS92 247 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 ZNF2Q9BSG1 426 aaPredicted RBP2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 PBDC1Q9BVG4 233 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 PECRQ9BY49 303 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 OR2D2Q9H210 308 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 NIT2Q9NQR4 276 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 SMCO4Q9NRQ5 59 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 UQCC1Q9NVA1 299 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 MED9Q9NWA0 146 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 RABAC1Q9UI14 185 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 AK3Q9UIJ7 227 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 KLK9Q9UKQ9 250 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 OR2W1Q9Y3N9 320 aa2.02□□□□□ -2.09
CHMP4A-208ENST00000534106 A0A087WTM6 91 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 A0A1B0GU03 582 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 LINC00587B1AMM8 73 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 K7EMT4 169 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 NDUFA4O00483 81 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 ITGB1BP1O14713 200 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 CA11O75493 328 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 CLN5O75503 358 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 ZNF735P0CB33 412 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 SMIM6P0DI80 62 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 DEFB130BP0DP73 79 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 DEFB130AP0DP74 79 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 CD37P11049 281 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 HIST1H1DP16402 221 aaKnown RBP2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 IGFBP3P17936 291 aaPredicted RBP2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 TBPP20226 339 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 TAGLN2P37802 199 aaKnown RBP2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 RAB5CP51148 216 aa2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 HNRNPA3P51991 378 aaKnown RBP2.01□□□□□ -2.09
CHMP4A-208ENST00000534106 PIGPP57054 158 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms