RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 PXDC1Q5TGL8 231 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 Q6ZTI0 123 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 S100A7AQ86SG5 101 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 BPIFA4PQ86YQ2 179 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 CCDC28AQ8IWP9 274 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
UBXN1-216ENST00000533908 VSIG2Q96IQ7 327 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 MGAT4CQ9UBM8 478 aa12.43□□□□□ -0.42
UBXN1-216ENST00000533908 MRPS16Q9Y3D3 137 aaKnown RBP12.43□□□□□ -0.42
UBXN1-216ENST00000533908 C7orf66A4D0T2 115 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 H3BNG1 76 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 RLN2P04090 185 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 BTF3P20290 206 aaKnown RBP12.42□□□□□ -0.42
UBXN1-216ENST00000533908 TAS2R30P59541 319 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 IAH1Q2TAA2 248 aaPredicted RBP12.42□□□□□ -0.42
UBXN1-216ENST00000533908 C4orf46Q504U0 113 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 TTC32Q5I0X7 151 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 ZNF546Q86UE3 836 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 TMPRSS5Q9H3S3 457 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 ZNF586Q9NXT0 402 aa12.42□□□□□ -0.42
UBXN1-216ENST00000533908 COX7A2P2O60397 106 aa12.41□□□□□ -0.42
UBXN1-216ENST00000533908 MBPP02686 304 aaPredicted RBP12.41□□□□□ -0.42
UBXN1-216ENST00000533908 S100A5P33763 92 aa12.41□□□□□ -0.42
UBXN1-216ENST00000533908 GSKIPQ9P0R6 139 aa12.41□□□□□ -0.42
UBXN1-216ENST00000533908 RNF24Q9Y225 148 aa12.41□□□□□ -0.42
UBXN1-216ENST00000533908 A0A096LPF7 62 aa12.4□□□□□ -0.42
UBXN1-216ENST00000533908 A0A1W2PPQ1 181 aa12.4□□□□□ -0.42
UBXN1-216ENST00000533908 SNURFLB1AK76 121 aa12.4□□□□□ -0.42
UBXN1-216ENST00000533908 NPIPB6E9PJ23 425 aa12.4□□□□□ -0.42
UBXN1-216ENST00000533908 BTCP35070 178 aa12.4□□□□□ -0.42
UBXN1-216ENST00000533908 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
UBXN1-216ENST00000533908 C10orf113Q5VZT2 155 aa12.4□□□□□ -0.42
UBXN1-216ENST00000533908 Q6ZRN7 208 aaPredicted RBP12.4□□□□□ -0.42
UBXN1-216ENST00000533908 GGACTQ9BVM4 153 aa12.4□□□□□ -0.42
UBXN1-216ENST00000533908 FUSP35637 526 aaKnown RBP eCLIP12.39□□□□□ -0.43
UBXN1-216ENST00000533908 MIC13Q5XKP0 118 aa12.39□□□□□ -0.43
UBXN1-216ENST00000533908 SDHCQ99643 169 aaPredicted RBP12.39□□□□□ -0.43
UBXN1-216ENST00000533908 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
UBXN1-216ENST00000533908 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
UBXN1-216ENST00000533908 PXMP4Q9Y6I8 212 aa12.39□□□□□ -0.43
UBXN1-216ENST00000533908 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
UBXN1-216ENST00000533908 LEPP41159 167 aa12.38□□□□□ -0.43
UBXN1-216ENST00000533908 LINC00315P59091 139 aa12.38□□□□□ -0.43
UBXN1-216ENST00000533908 C11orf72Q8NBR9 251 aa12.38□□□□□ -0.43
UBXN1-216ENST00000533908 ODF3Q96PU9 254 aa12.38□□□□□ -0.43
UBXN1-216ENST00000533908 PYGO2Q9BRQ0 406 aa12.38□□□□□ -0.43
UBXN1-216ENST00000533908 M0R3E3 92 aa12.37□□□□□ -0.43
UBXN1-216ENST00000533908 ZNF324O75467 553 aaPredicted RBP12.37□□□□□ -0.43
UBXN1-216ENST00000533908 CAMLGP49069 296 aa12.37□□□□□ -0.43
UBXN1-216ENST00000533908 ERCC8Q13216 396 aa12.37□□□□□ -0.43
UBXN1-216ENST00000533908 NRARPQ7Z6K4 114 aa12.37□□□□□ -0.43
UBXN1-216ENST00000533908 MITD1Q8WV92 249 aa12.37□□□□□ -0.43
UBXN1-216ENST00000533908 CCSO14618 274 aa12.36□□□□□ -0.43
UBXN1-216ENST00000533908 CD300CQ08708 224 aa12.36□□□□□ -0.43
UBXN1-216ENST00000533908 C11orf1Q9H5F2 150 aa12.36□□□□□ -0.43
UBXN1-216ENST00000533908 KLF12Q9Y4X4 402 aa12.36□□□□□ -0.43
UBXN1-216ENST00000533908 TNFRSF18Q9Y5U5 241 aa12.36□□□□□ -0.43
UBXN1-216ENST00000533908 CST7O76096 145 aa12.35□□□□□ -0.43
UBXN1-216ENST00000533908 NDUFB4O95168 129 aa12.35□□□□□ -0.43
UBXN1-216ENST00000533908 GUK1Q16774 197 aa12.35□□□□□ -0.43
UBXN1-216ENST00000533908 SPANXN2Q5MJ10 180 aa12.35□□□□□ -0.43
UBXN1-216ENST00000533908 FAM19A4Q96LR4 140 aa12.35□□□□□ -0.43
UBXN1-216ENST00000533908 C18orf15Q96N68 181 aa12.35□□□□□ -0.43
UBXN1-216ENST00000533908 RBM38Q9H0Z9 239 aaKnown RBP12.35□□□□□ -0.43
UBXN1-216ENST00000533908 HERC1Q15751 4861 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 C7orf71A4D174 169 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 FAM24AA6NFZ4 105 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 CCDC160A6NGH7 325 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 SLC25A5P05141 298 aaKnown RBP12.34□□□□□ -0.43
UBXN1-216ENST00000533908 INPP1P49441 399 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 BTN1A1Q13410 526 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 TRIQKQ629K1 86 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 Q6ZQT7 251 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 Q6ZRG5 221 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 AGPAT4-IT1Q9H0P7 198 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 FUT9Q9Y231 359 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 WDR83OSQ9Y284 106 aa12.34□□□□□ -0.43
UBXN1-216ENST00000533908 TRBV19A0A075B6N1 114 aa12.33□□□□□ -0.44
UBXN1-216ENST00000533908 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
UBXN1-216ENST00000533908 KLLNB2CW77 178 aa12.33□□□□□ -0.44
UBXN1-216ENST00000533908 SIVA1O15304 175 aa12.33□□□□□ -0.44
UBXN1-216ENST00000533908 LINC00467Q9BRT7 94 aa12.33□□□□□ -0.44
UBXN1-216ENST00000533908 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
UBXN1-216ENST00000533908 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 L7N2F9 121 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 ZNF253O75346 499 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 XGP55808 180 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 VAMP2P63027 116 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 VWC2Q2TAL6 325 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 ANXA2RQ3ZCQ2 193 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 SLC39A9Q9NUM3 307 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 TP53TG3Q9ULZ0 132 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 FAT1Q14517 4588 aa12.32□□□□□ -0.44
UBXN1-216ENST00000533908 PLA2G10O15496 165 aa12.31□□□□□ -0.44
UBXN1-216ENST00000533908 SPINK4O60575 86 aa12.31□□□□□ -0.44
UBXN1-216ENST00000533908 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
UBXN1-216ENST00000533908 RPL29P47914 159 aaKnown RBP12.31□□□□□ -0.44
UBXN1-216ENST00000533908 BCAP31P51572 246 aa12.31□□□□□ -0.44
UBXN1-216ENST00000533908 RAB31Q13636 194 aa12.31□□□□□ -0.44
UBXN1-216ENST00000533908 PRR9Q5T870 116 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms