RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 AAMDCQ9H7C9 122 aa12.1□□□□□ -0.47
PACSIN3-210ENST00000533686 A8MTW9 85 aa12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 F6UB75 175 aa12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 NKX2-5P52952 324 aaPredicted RBP12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 MORN3Q6PF18 240 aaPredicted RBP12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 PHYHIPLQ96FC7 376 aa12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 TMEM167BQ9NRX6 74 aa12.09□□□□□ -0.47
PACSIN3-210ENST00000533686 GCHFRP30047 84 aa12.08□□□□□ -0.48
PACSIN3-210ENST00000533686 RAB5CP51148 216 aa12.08□□□□□ -0.48
PACSIN3-210ENST00000533686 OR8A1Q8NGG7 326 aa12.08□□□□□ -0.48
PACSIN3-210ENST00000533686 SPATA25Q9BR10 227 aa12.08□□□□□ -0.48
PACSIN3-210ENST00000533686 ZMAT4Q9H898 229 aa12.08□□□□□ -0.48
PACSIN3-210ENST00000533686 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 ICAM4Q14773 271 aa12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 Q6ZWC4 215 aa12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 EXOC3-AS1Q8N2X6 119 aa12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 MBD3L1Q8WWY6 194 aa12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 Q9H3A6 140 aa12.07□□□□□ -0.48
PACSIN3-210ENST00000533686 MAP1LC3B2A6NCE7 125 aa12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 M0R3E3 92 aa12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 FHITP49789 147 aa12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 CNN1P51911 297 aaKnown RBP12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 MAP1LC3BQ9GZQ8 125 aa12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 TP53TG1Q9Y2A0 90 aa12.06□□□□□ -0.48
PACSIN3-210ENST00000533686 PRAC2D3DTV9 90 aa12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 CA1P00915 261 aaPredicted RBP12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 GIG44P09565 113 aaPredicted RBP12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 SULT1A2P50226 295 aa12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 HIST1H1AQ02539 215 aaPredicted RBP12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 FAM74A1Q5RGS3 127 aa12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 ARL6IP6Q8N6S5 226 aa12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 OR10J6PQ8NGY7 276 aa12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 OTORQ9NRC9 128 aa12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 AGRNO00468 2067 aa12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 HUWE1Q7Z6Z7 4374 aaKnown RBP12.05□□□□□ -0.48
PACSIN3-210ENST00000533686 IGKV3-20P01619 116 aa12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 ZNF705DP0CH99 300 aaPredicted RBP12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 ZNF705BP0CI00 300 aaPredicted RBP12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 CSN1S1P47710 185 aa12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 AMTNQ6UX39 209 aa12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 RXFP4Q8TDU9 374 aa12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 C1QTNF4Q9BXJ3 329 aa12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
PACSIN3-210ENST00000533686 PGPA6NDG6 321 aa12.03□□□□□ -0.48
PACSIN3-210ENST00000533686 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
PACSIN3-210ENST00000533686 FGF8P55075 233 aaPredicted RBP12.03□□□□□ -0.48
PACSIN3-210ENST00000533686 SFT2D1Q8WV19 159 aa12.03□□□□□ -0.48
PACSIN3-210ENST00000533686 RNF183Q96D59 192 aa12.03□□□□□ -0.48
PACSIN3-210ENST00000533686 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
PACSIN3-210ENST00000533686 A0A1W2PRE2 83 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 SPRY2O43597 315 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 AMBPP02760 352 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 DEFB135Q30KP9 77 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 IQCF2Q8IXL9 164 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 RCHY1Q96PM5 261 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 OVOL2Q9BRP0 275 aa12.02□□□□□ -0.49
PACSIN3-210ENST00000533686 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 RBAKDNA6NC62 111 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 SLC25A5P05141 298 aaKnown RBP12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 PRB4P10163 310 aaPredicted RBP12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 C9orf47Q6ZRZ4 202 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 CSNK1G2-AS1Q8NCQ2 148 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 CMTM2Q8TAZ6 248 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 SLC35B3Q9H1N7 401 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 U3KQK5 164 aa12.01□□□□□ -0.49
PACSIN3-210ENST00000533686 DIRC3C9JPN6 131 aa12□□□□□ -0.49
PACSIN3-210ENST00000533686 NKX6-2Q9C056 277 aaPredicted RBP12□□□□□ -0.49
PACSIN3-210ENST00000533686 RETNQ9HD89 108 aa12□□□□□ -0.49
PACSIN3-210ENST00000533686 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
PACSIN3-210ENST00000533686 ARL2-SNX15V9GYD0 113 aa12□□□□□ -0.49
PACSIN3-210ENST00000533686 BOLA2-SMG1P6H3BVE0 249 aa11.99□□□□□ -0.49
PACSIN3-210ENST00000533686 PPT1P50897 306 aa11.99□□□□□ -0.49
PACSIN3-210ENST00000533686 SUMO1P63165 101 aaKnown RBP11.99□□□□□ -0.49
PACSIN3-210ENST00000533686 C5orf17Q8NAS9 161 aa11.99□□□□□ -0.49
PACSIN3-210ENST00000533686 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
PACSIN3-210ENST00000533686 XCL2Q9UBD3 114 aa11.99□□□□□ -0.49
PACSIN3-210ENST00000533686 IGKV2-40A0A087WW87 121 aaPredicted RBP11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 SERTM2A0A1B0GWG4 89 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 FAM74A7A6NL05 159 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 GGTLC3B5MD39 225 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 TEX46H3BTG2 121 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 IGKV2D-40P01614 121 aaPredicted RBP11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 HBE1P02100 147 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 CT45A10P0DMU9 189 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 TSPOP30536 169 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 FXYD7P58549 80 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 ERCC8Q13216 396 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 ALKAL2Q6UX46 152 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 IGF2BP2-AS1Q96M15 143 aa11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
PACSIN3-210ENST00000533686 NBEAL2Q6ZNJ1 2754 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms