RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PTTG2Q9NZH5 202 aa16.6■□□□□ 0.25
SMPD1-209ENST00000533196 TRAV5A0A0B4J249 113 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 PLAC8L1A1L4L8 177 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 E5RGE8 158 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 H7BYZ3 331 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 PRM2P04554 102 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 SNRPCP09234 159 aaKnown RBP16.59■□□□□ 0.25
SMPD1-209ENST00000533196 AZU1P20160 251 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 CYCSP99999 105 aaKnown RBP16.59■□□□□ 0.25
SMPD1-209ENST00000533196 UBE2DNLQ8IWF7 75 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 C15orf53Q8NAA6 179 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 MRPL53Q96EL3 112 aaKnown RBP16.59■□□□□ 0.25
SMPD1-209ENST00000533196 ODF3Q96PU9 254 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 TMEM14CQ9P0S9 112 aa16.59■□□□□ 0.25
SMPD1-209ENST00000533196 H3BTX0 84 aa16.58■□□□□ 0.24
SMPD1-209ENST00000533196 LGALS9BQ3B8N2 356 aa16.57■□□□□ 0.24
SMPD1-209ENST00000533196 TMEM88Q6PEY1 159 aa16.57■□□□□ 0.24
SMPD1-209ENST00000533196 TMEM263Q8WUH6 116 aaKnown RBP16.57■□□□□ 0.24
SMPD1-209ENST00000533196 NPCDR1Q9BY65 106 aa16.57■□□□□ 0.24
SMPD1-209ENST00000533196 ZNF586Q9NXT0 402 aa16.57■□□□□ 0.24
SMPD1-209ENST00000533196 PRAC2D3DTV9 90 aa16.56■□□□□ 0.24
SMPD1-209ENST00000533196 INMT-MINDY4F8WBC2 141 aa16.56■□□□□ 0.24
SMPD1-209ENST00000533196 HIST1H1EP10412 219 aaKnown RBP16.56■□□□□ 0.24
SMPD1-209ENST00000533196 PDE6HQ13956 83 aa16.56■□□□□ 0.24
SMPD1-209ENST00000533196 OR5C1Q8NGR4 320 aa16.56■□□□□ 0.24
SMPD1-209ENST00000533196 TIMM8BQ9Y5J9 83 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-209ENST00000533196 TRBV19A0A075B6N1 114 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 NPIPB6E9PJ23 425 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 ATP5G1P05496 136 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 DEFB130BP0DP73 79 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 DEFB130AP0DP74 79 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 LEPP41159 167 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 ATP5G3P48201 142 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 IFITM3Q01628 133 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 NHLH2Q02577 135 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 RNASE8Q8TDE3 154 aaKnown RBP16.55■□□□□ 0.24
SMPD1-209ENST00000533196 KCNIP2Q9NS61 270 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 PRELID1Q9Y255 219 aa16.55■□□□□ 0.24
SMPD1-209ENST00000533196 DNAH17Q9UFH2 4485 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 CBY3A6NI87 242 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 SIX6O95475 246 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 HTN1P15515 57 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 FAM3BP58499 235 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-209ENST00000533196 CCDC28AQ8IWP9 274 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 MARVELD1Q9BSK0 173 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 DNAH2Q9P225 4427 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 NACAE9PAV3 2078 aa16.54■□□□□ 0.24
SMPD1-209ENST00000533196 HECTD4Q9Y4D8 3996 aa16.53■□□□□ 0.24
SMPD1-209ENST00000533196 PRB4P10163 310 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-209ENST00000533196 GFI1BQ5VTD9 330 aa16.53■□□□□ 0.24
SMPD1-209ENST00000533196 OR5AC2Q9NZP5 309 aa16.53■□□□□ 0.24
SMPD1-209ENST00000533196 DEFA1P59665 94 aa16.52■□□□□ 0.24
SMPD1-209ENST00000533196 DEFA3P59666 94 aa16.52■□□□□ 0.24
SMPD1-209ENST00000533196 TIMM9Q9Y5J7 89 aa16.52■□□□□ 0.24
SMPD1-209ENST00000533196 CT45A10P0DMU9 189 aa16.51■□□□□ 0.23
SMPD1-209ENST00000533196 KIR3DS1Q14943 382 aa16.51■□□□□ 0.23
SMPD1-209ENST00000533196 FCN2Q15485 313 aa16.51■□□□□ 0.23
SMPD1-209ENST00000533196 LRRC37A5PQ49AS3 106 aa16.51■□□□□ 0.23
SMPD1-209ENST00000533196 THAP6Q8TBB0 222 aa16.51■□□□□ 0.23
SMPD1-209ENST00000533196 PARD6GQ9BYG4 376 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-209ENST00000533196 FAT2Q9NYQ8 4349 aa16.51■□□□□ 0.23
SMPD1-209ENST00000533196 F5H768 121 aa16.5■□□□□ 0.23
SMPD1-209ENST00000533196 H0YIZ8 118 aa16.5■□□□□ 0.23
SMPD1-209ENST00000533196 NDUFB4O95168 129 aa16.5■□□□□ 0.23
SMPD1-209ENST00000533196 PYGO2Q9BRQ0 406 aa16.5■□□□□ 0.23
SMPD1-209ENST00000533196 MRPL32Q9BYC8 188 aaKnown RBP16.5■□□□□ 0.23
SMPD1-209ENST00000533196 WDR61Q9GZS3 305 aaKnown RBP16.5■□□□□ 0.23
SMPD1-209ENST00000533196 AAMDCQ9H7C9 122 aa16.5■□□□□ 0.23
SMPD1-209ENST00000533196 NOP10Q9NPE3 64 aaKnown RBP16.5■□□□□ 0.23
SMPD1-209ENST00000533196 C17orf112F2Z3M2 114 aa16.49■□□□□ 0.23
SMPD1-209ENST00000533196 GCSAMLQ5JQS6 135 aa16.49■□□□□ 0.23
SMPD1-209ENST00000533196 PPP1R1CQ8WVI7 109 aa16.49■□□□□ 0.23
SMPD1-209ENST00000533196 LINC00477Q96M19 166 aa16.49■□□□□ 0.23
SMPD1-209ENST00000533196 M0R2N4 97 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 M0R3E3 92 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 SLC25A5P05141 298 aaKnown RBP16.48■□□□□ 0.23
SMPD1-209ENST00000533196 PET100P0DJ07 73 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 PYYP10082 97 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 H2BFSP57053 126 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 CLINT1Q14677 625 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 Q6ZR54 194 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 LINC00612Q8N6U2 182 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 SLC25A2Q9BXI2 301 aa16.48■□□□□ 0.23
SMPD1-209ENST00000533196 BLNKQ8WV28 456 aa16.47■□□□□ 0.23
SMPD1-209ENST00000533196 FAM167A-AS1Q96KT0 104 aa16.47■□□□□ 0.23
SMPD1-209ENST00000533196 TRAV12-3A0A0B4J271 114 aa16.46■□□□□ 0.23
SMPD1-209ENST00000533196 SNURFLB1AK76 121 aa16.46■□□□□ 0.23
SMPD1-209ENST00000533196 SSNA1O43805 119 aa16.46■□□□□ 0.23
SMPD1-209ENST00000533196 C9orf47Q6ZRZ4 202 aa16.46■□□□□ 0.23
SMPD1-209ENST00000533196 MIR17HGQ75NE6 70 aa16.46■□□□□ 0.23
SMPD1-209ENST00000533196 ATG101Q9BSB4 218 aa16.46■□□□□ 0.23
SMPD1-209ENST00000533196 OR51M1Q9H341 326 aa16.46■□□□□ 0.23
SMPD1-209ENST00000533196 C7orf71A4D174 169 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 KLLNB2CW77 178 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 J3KRW8 73 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 RTL8CO15255 209 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 MPC2O95563 127 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 NMBP08949 121 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 NBEAP1P0C6P0 100 aa16.45■□□□□ 0.22
SMPD1-209ENST00000533196 SOHLH1Q5JUK2 328 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms