RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TMEM14CQ9P0S9 112 aa21.62■■□□□ 1.05
SSSCA1-207ENST00000533115 PRAC2D3DTV9 90 aa21.61■■□□□ 1.05
SSSCA1-207ENST00000533115 PET100P0DJ07 73 aa21.61■■□□□ 1.05
SSSCA1-207ENST00000533115 WDR61Q9GZS3 305 aaKnown RBP21.61■■□□□ 1.05
SSSCA1-207ENST00000533115 ZNF705GA8MUZ8 300 aaPredicted RBP21.6■■□□□ 1.05
SSSCA1-207ENST00000533115 ZNF253O75346 499 aa21.6■■□□□ 1.05
SSSCA1-207ENST00000533115 OR10J6PQ8NGY7 276 aa21.6■■□□□ 1.05
SSSCA1-207ENST00000533115 PRM2P04554 102 aa21.59■■□□□ 1.05
SSSCA1-207ENST00000533115 CDKN1BP46527 198 aa21.59■■□□□ 1.05
SSSCA1-207ENST00000533115 PLA2G2EQ9NZK7 142 aa21.59■■□□□ 1.05
SSSCA1-207ENST00000533115 TRBV19A0A075B6N1 114 aa21.58■■□□□ 1.05
SSSCA1-207ENST00000533115 HIST1H1EP10412 219 aaKnown RBP21.58■■□□□ 1.05
SSSCA1-207ENST00000533115 OXA1LQ15070 435 aa21.58■■□□□ 1.05
SSSCA1-207ENST00000533115 TMEM256Q8N2U0 113 aa21.58■■□□□ 1.05
SSSCA1-207ENST00000533115 ATP5SQ99766 215 aa21.58■■□□□ 1.05
SSSCA1-207ENST00000533115 KCNIP2Q9NS61 270 aa21.58■■□□□ 1.05
SSSCA1-207ENST00000533115 LINC01587Q99440 93 aa21.57■■□□□ 1.04
SSSCA1-207ENST00000533115 HSPB11Q9Y547 144 aa21.57■■□□□ 1.04
SSSCA1-207ENST00000533115 PYYP10082 97 aa21.56■■□□□ 1.04
SSSCA1-207ENST00000533115 TSPOP30536 169 aa21.56■■□□□ 1.04
SSSCA1-207ENST00000533115 SLC25A2Q9BXI2 301 aa21.56■■□□□ 1.04
SSSCA1-207ENST00000533115 ALG5Q9Y673 324 aa21.56■■□□□ 1.04
SSSCA1-207ENST00000533115 C17orf112F2Z3M2 114 aa21.55■■□□□ 1.04
SSSCA1-207ENST00000533115 RPL12P30050 165 aaKnown RBP21.55■■□□□ 1.04
SSSCA1-207ENST00000533115 NDUFAF3Q9BU61 184 aa21.55■■□□□ 1.04
SSSCA1-207ENST00000533115 MBD2Q9UBB5 411 aa21.55■■□□□ 1.04
SSSCA1-207ENST00000533115 NDUFB4O95168 129 aa21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 PTTG1O95997 202 aa21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 AZU1P20160 251 aa21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 TAS2R60P59551 318 aa21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 PDE6HQ13956 83 aa21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 MIR17HGQ75NE6 70 aa21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 MRPL53Q96EL3 112 aaKnown RBP21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 TIMM9Q9Y5J7 89 aa21.54■■□□□ 1.04
SSSCA1-207ENST00000533115 DAD1P61803 113 aa21.53■■□□□ 1.04
SSSCA1-207ENST00000533115 FAM167A-AS1Q96KT0 104 aa21.53■■□□□ 1.04
SSSCA1-207ENST00000533115 PARD6GQ9BYG4 376 aaPredicted RBP21.53■■□□□ 1.04
SSSCA1-207ENST00000533115 DNAH6Q9C0G6 4158 aa21.52■■□□□ 1.04
SSSCA1-207ENST00000533115 LYRM9A8MSI8 78 aa21.52■■□□□ 1.04
SSSCA1-207ENST00000533115 NPIPB6E9PJ23 425 aa21.52■■□□□ 1.04
SSSCA1-207ENST00000533115 BLNKQ8WV28 456 aa21.52■■□□□ 1.04
SSSCA1-207ENST00000533115 C20orf144Q9BQM9 153 aa21.52■■□□□ 1.04
SSSCA1-207ENST00000533115 MRPL32Q9BYC8 188 aaKnown RBP21.52■■□□□ 1.04
SSSCA1-207ENST00000533115 BIRC6Q9NR09 4857 aa21.51■■□□□ 1.03
SSSCA1-207ENST00000533115 M0R3E3 92 aa21.51■■□□□ 1.03
SSSCA1-207ENST00000533115 KIR3DS1Q14943 382 aa21.51■■□□□ 1.03
SSSCA1-207ENST00000533115 FAM210BQ96KR6 192 aa21.51■■□□□ 1.03
SSSCA1-207ENST00000533115 SMIM3Q9BZL3 60 aa21.51■■□□□ 1.03
SSSCA1-207ENST00000533115 PRELID1Q9Y255 219 aa21.51■■□□□ 1.03
SSSCA1-207ENST00000533115 PLAC8L1A1L4L8 177 aa21.5■■□□□ 1.03
SSSCA1-207ENST00000533115 CT45A10P0DMU9 189 aa21.5■■□□□ 1.03
SSSCA1-207ENST00000533115 HTN1P15515 57 aa21.5■■□□□ 1.03
SSSCA1-207ENST00000533115 HTN3P15516 51 aa21.5■■□□□ 1.03
SSSCA1-207ENST00000533115 ODF3Q96PU9 254 aa21.5■■□□□ 1.03
SSSCA1-207ENST00000533115 FUT9Q9Y231 359 aa21.5■■□□□ 1.03
SSSCA1-207ENST00000533115 H7BYZ3 331 aa21.49■■□□□ 1.03
SSSCA1-207ENST00000533115 IFNA5P01569 189 aa21.49■■□□□ 1.03
SSSCA1-207ENST00000533115 GFI1BQ5VTD9 330 aa21.49■■□□□ 1.03
SSSCA1-207ENST00000533115 SCGB1C1Q8TD33 95 aa21.49■■□□□ 1.03
SSSCA1-207ENST00000533115 OR51M1Q9H341 326 aa21.49■■□□□ 1.03
SSSCA1-207ENST00000533115 LEPP41159 167 aa21.48■■□□□ 1.03
SSSCA1-207ENST00000533115 EXOC3-AS1Q8N2X6 119 aa21.48■■□□□ 1.03
SSSCA1-207ENST00000533115 C16orf74Q96GX8 76 aa21.48■■□□□ 1.03
SSSCA1-207ENST00000533115 AAMDCQ9H7C9 122 aa21.48■■□□□ 1.03
SSSCA1-207ENST00000533115 NBEAP1P0C6P0 100 aa21.47■■□□□ 1.03
SSSCA1-207ENST00000533115 PAXXQ9BUH6 204 aa21.47■■□□□ 1.03
SSSCA1-207ENST00000533115 FFAR4Q5NUL3 377 aa21.46■■□□□ 1.03
SSSCA1-207ENST00000533115 FRAS1Q86XX4 4008 aa21.45■■□□□ 1.03
SSSCA1-207ENST00000533115 J3KRW8 73 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 P0DMU3 169 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 FAM231AP0DMU4 169 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 FAM231CP0DMU5 169 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 DEFB130BP0DP73 79 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 DEFB130AP0DP74 79 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 ERCC8Q13216 396 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 ICAM4Q14773 271 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 ZNF493Q6ZR52 646 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 FXYD5Q96DB9 178 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 WFDC1Q9HC57 220 aa21.45■■□□□ 1.02
SSSCA1-207ENST00000533115 OR10J4P0C629 311 aa21.44■■□□□ 1.02
SSSCA1-207ENST00000533115 FCN2Q15485 313 aa21.44■■□□□ 1.02
SSSCA1-207ENST00000533115 RNASE8Q8TDE3 154 aaKnown RBP21.44■■□□□ 1.02
SSSCA1-207ENST00000533115 TMEM263Q8WUH6 116 aaKnown RBP21.44■■□□□ 1.02
SSSCA1-207ENST00000533115 RNF141Q8WVD5 230 aa21.44■■□□□ 1.02
SSSCA1-207ENST00000533115 MED28Q9H204 178 aa21.44■■□□□ 1.02
SSSCA1-207ENST00000533115 DNAH10Q8IVF4 4471 aa21.44■■□□□ 1.02
SSSCA1-207ENST00000533115 LINC00477Q96M19 166 aa21.43■■□□□ 1.02
SSSCA1-207ENST00000533115 TIMM8BQ9Y5J9 83 aaPredicted RBP21.43■■□□□ 1.02
SSSCA1-207ENST00000533115 OR7C2O60412 319 aa21.42■■□□□ 1.02
SSSCA1-207ENST00000533115 FAM122CQ6P4D5 195 aa21.42■■□□□ 1.02
SSSCA1-207ENST00000533115 AGPAT4-IT1Q9H0P7 198 aa21.42■■□□□ 1.02
SSSCA1-207ENST00000533115 TRAV12-3A0A0B4J271 114 aa21.41■■□□□ 1.02
SSSCA1-207ENST00000533115 CCDC28AQ8IWP9 274 aa21.41■■□□□ 1.02
SSSCA1-207ENST00000533115 TMEM88Q6PEY1 159 aa21.4■■□□□ 1.02
SSSCA1-207ENST00000533115 C9orf47Q6ZRZ4 202 aa21.4■■□□□ 1.02
SSSCA1-207ENST00000533115 POM121L12Q8N7R1 296 aa21.4■■□□□ 1.02
SSSCA1-207ENST00000533115 ZNF503Q96F45 646 aa21.4■■□□□ 1.02
SSSCA1-207ENST00000533115 PHYHIPLQ96FC7 376 aa21.4■■□□□ 1.02
SSSCA1-207ENST00000533115 FAM19A4Q96LR4 140 aa21.4■■□□□ 1.02
SSSCA1-207ENST00000533115 SLC25A5P05141 298 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms