RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 UNC80Q8N2C7 3258 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 EP300Q09472 2414 aaPredicted RBP7.44□□□□□ -1.22
BDNF-216ENST00000532997 PLXNB1O43157 2135 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 KLF17Q5JT82 389 aaPredicted RBP7.44□□□□□ -1.22
BDNF-216ENST00000532997 PCNX1Q96RV3 2341 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 FAM90A27PA6NNH2 459 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 OOSP1A8MZH6 123 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 TEX22C9J3V5 150 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.44□□□□□ -1.22
BDNF-216ENST00000532997 ECSCRQ19T08 205 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 NAA38Q9BRA0 125 aaKnown RBP7.44□□□□□ -1.22
BDNF-216ENST00000532997 CHAC1Q9BUX1 264 aa7.44□□□□□ -1.22
BDNF-216ENST00000532997 WNK2Q9Y3S1 2297 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 CLEC3BP05452 202 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 RITA1Q96K30 269 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 CSTL1Q9H114 145 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 ARFGEF3Q5TH69 2177 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 PTPRBP23467 1997 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 NDUFS7O75251 213 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 NPYP01303 97 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 K7EIM0 57 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 TNFRSF6BO95407 300 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 FXYD7P58549 80 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 PRB3Q04118 309 aaPredicted RBP7.43□□□□□ -1.22
BDNF-216ENST00000532997 SRSF1Q07955 248 aaKnown RBP eCLIP7.43□□□□□ -1.22
BDNF-216ENST00000532997 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
BDNF-216ENST00000532997 LAGE3Q14657 143 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 GATD1Q8NB37 220 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 ZNF479Q96JC4 524 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 C17orf77Q96MU5 243 aa7.43□□□□□ -1.22
BDNF-216ENST00000532997 E7EQL1 145 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 PPP1R17O96001 155 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 IGLV1-47P01700 117 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 ZC2HC1BQ5TFG8 222 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.42□□□□□ -1.22
BDNF-216ENST00000532997 M0R1W7 72 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 WT1P19544 449 aaPredicted RBP7.42□□□□□ -1.22
BDNF-216ENST00000532997 PLNP26678 52 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 ZNF562Q6V9R5 426 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 Q8TAT8 98 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 TMEM158Q8WZ71 300 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 EEF1AKMT3Q96AZ1 226 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 SIGMAR1Q99720 223 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 ZGRF1Q86YA3 2104 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 A0A1B0GV72 72 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 FSTL3O95633 263 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 IGHV3-23P01764 117 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 ORMDL2Q53FV1 153 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 Q8N8P6 123 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 C16orf92Q96LL3 132 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 HIGD1BQ9P298 99 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 GVINP1Q7Z2Y8 2422 aa7.42□□□□□ -1.22
BDNF-216ENST00000532997 CRYGBP07316 175 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 EVI2AP22794 236 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 RPL11P62913 178 aaKnown RBP7.41□□□□□ -1.22
BDNF-216ENST00000532997 TAL2Q16559 108 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 PIP4P1Q86T03 277 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 GTSCR1Q86UQ5 136 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 IGF2-ASQ6U949 168 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 WI2-2373I1.2A0A1W2PRP0 233 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 LYNX1G3V0Z9 82 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 LYNX1P0DP58 116 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 ZNF672Q499Z4 452 aaPredicted RBP7.41□□□□□ -1.22
BDNF-216ENST00000532997 OR10J6PQ8NGY7 276 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 SCGB3A1Q96QR1 104 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 PRO3102Q9H379 93 aa7.41□□□□□ -1.22
BDNF-216ENST00000532997 CACNA1HO95180 2353 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 IGLV2-11P01706 119 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 MGPP08493 103 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 MINOS1Q5TGZ0 78 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 PRSS57Q6UWY2 283 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 PRSS33Q8NF86 280 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 ZNF48Q96MX3 618 aaPredicted RBP7.4□□□□□ -1.22
BDNF-216ENST00000532997 TP73-AS1Q9UF72 201 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 MINOS1-NBL1R4GNA1 71 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 DSCAML1Q8TD84 2053 aa7.4□□□□□ -1.22
BDNF-216ENST00000532997 CDH23Q9H251 3354 aa7.4□□□□□ -1.23
BDNF-216ENST00000532997 SPTA1P02549 2419 aa7.4□□□□□ -1.23
BDNF-216ENST00000532997 IGHV3-35A0A0C4DH35 117 aa7.4□□□□□ -1.23
BDNF-216ENST00000532997 CIDEAO60543 219 aa7.4□□□□□ -1.23
BDNF-216ENST00000532997 EGR2P11161 476 aaPredicted RBP7.4□□□□□ -1.23
BDNF-216ENST00000532997 SRSF2Q01130 221 aaKnown RBP7.4□□□□□ -1.23
BDNF-216ENST00000532997 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.23
BDNF-216ENST00000532997 DKK2Q9UBU2 259 aa7.4□□□□□ -1.23
BDNF-216ENST00000532997 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.23
BDNF-216ENST00000532997 PRB4P10163 310 aaPredicted RBP7.39□□□□□ -1.23
BDNF-216ENST00000532997 PCP2Q8IVA1 136 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 RAXQ9Y2V3 346 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 U3KQK5 164 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 ACACAQ13085 2346 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 LINC01549A6NIU2 74 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 PRTN3P24158 256 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 MTURNQ8N3F0 131 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 IGFBPL1Q8WX77 278 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 ABHD17AQ96GS6 310 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 H7C1H1 209 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 NDUFA3O95167 84 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 SCGB1C2P0DMR2 95 aa7.39□□□□□ -1.23
BDNF-216ENST00000532997 PPIFP30405 207 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms