RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 RASL10AQ92737 203 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
COLCA1-203ENST00000532918 IFITM1P13164 125 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 MPV17L2Q567V2 206 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 MDC1Q14676 2089 aaKnown RBP8.63□□□□□ -1.03
COLCA1-203ENST00000532918 NCR2O95944 276 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 LINC00158P58513 81 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 KIR3DS1Q14943 382 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 ABCA4P78363 2273 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 SCN8AQ9UQD0 1980 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 A0A1W2PPI3 338 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 LAGE3Q14657 143 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 TEX43Q6ZNM6 134 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 DKK4Q9UBT3 224 aa8.63□□□□□ -1.03
COLCA1-203ENST00000532918 WT1P19544 449 aaPredicted RBP8.62□□□□□ -1.03
COLCA1-203ENST00000532918 DEFB112Q30KQ8 113 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 XCL2Q9UBD3 114 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 IGKV1-16P04430 117 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 SLAQ13239 276 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 TRBV20-1A0A075B6N2 111 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 IGHV2-70P01814 119 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 JPT2Q9H910 190 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 QRFPP83859 136 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 GFI1BQ5VTD9 330 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 GPR179Q6PRD1 2367 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 TEX48A0A1B0GUV7 120 aa8.62□□□□□ -1.03
COLCA1-203ENST00000532918 G3V318 75 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 SH2D1AO60880 128 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 GAGE12JA6NER3 117 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 GAGE7O76087 117 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 GAGE12FP0CL80 117 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 GAGE12GP0CL81 117 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 GAGE12IP0CL82 117 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 GAGE4Q13068 117 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 GUSBP1Q15486 140 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 CD300EQ496F6 205 aaPredicted RBP8.61□□□□□ -1.03
COLCA1-203ENST00000532918 C8orf31Q8N9H6 132 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 TRBV24-1A0A075B6N3 115 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
COLCA1-203ENST00000532918 ZNF114Q8NC26 417 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
COLCA1-203ENST00000532918 SNRNP200O75643 2136 aaKnown RBP8.61□□□□□ -1.03
COLCA1-203ENST00000532918 A0A087X0K7 114 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 TRAV8-3A0A0A6YYJ7 113 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 K7EM74 188 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 C17orf58Q2M2W7 97 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 OCC1Q8TAD7 63 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 C9JAW5 83 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 PLEKHB2Q96CS7 222 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 PRORYQ9H606 182 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 F8WEM9 126 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
COLCA1-203ENST00000532918 LY6G6FQ5SQ64 297 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 C10orf105Q8TEF2 133 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 NDUFA4L2Q9NRX3 87 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 EVI2AP22794 236 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 ADORA2A-AS1P86434 159 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
COLCA1-203ENST00000532918 RASL11AQ6T310 242 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 TMEM242Q9NWH2 141 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 LY96Q9Y6Y9 160 aa8.6□□□□□ -1.03
COLCA1-203ENST00000532918 TRAV1-1A0A0B4J248 108 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 COLCA2A8K830 154 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 PYY3Q5JQD4 70 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.03
COLCA1-203ENST00000532918 ANKRD29Q8N6D5 301 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 A0A0U1RRA0 63 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 CCL24O00175 119 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 INAFM2P0DMQ5 153 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 NTF4P34130 210 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 BTCP35070 178 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 FOXE3Q13461 319 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 LYZL1Q6UWQ5 148 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 DIDO1Q9BTC0 2240 aaKnown RBP8.59□□□□□ -1.03
COLCA1-203ENST00000532918 C15orf62A8K5M9 175 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 GRNP28799 593 aaKnown RBP8.59□□□□□ -1.03
COLCA1-203ENST00000532918 PPDPFLQ8WWR9 84 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 TMEM126AQ9H061 195 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 TMEM14BQ9NUH8 114 aa8.59□□□□□ -1.03
COLCA1-203ENST00000532918 IGHV4-30-2A0A087WSY4 118 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 C1orf159Q96HA4 380 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 AGMATQ9BSE5 352 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 AKAP6Q13023 2319 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 TRBV25-1A0A075B6N4 114 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 IGHV4-61A0A0C4DH41 118 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 H0YIZ8 118 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 IGHV4-59P01825 116 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 AZU1P20160 251 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 RBMY1FQ15415 496 aaKnown RBP8.58□□□□□ -1.04
COLCA1-203ENST00000532918 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
COLCA1-203ENST00000532918 WFDC1Q9HC57 220 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 H3BMM0 161 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 GAGE5Q13069 117 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 GAGE6Q13070 117 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 FAM120AOSQ5T036 256 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 Q8TAT8 98 aa8.58□□□□□ -1.04
COLCA1-203ENST00000532918 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms