RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 SEC11BP0C7V7 166 aa8.88□□□□□ -0.99
TRAF3IP2-212ENST00000532708 S100A7AQ86SG5 101 aa8.88□□□□□ -0.99
TRAF3IP2-212ENST00000532708 APRG1Q8IVJ8 170 aa8.88□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST3H2BBQ8N257 126 aa8.88□□□□□ -0.99
TRAF3IP2-212ENST00000532708 OR10D4PQ8NGN7 298 aa8.88□□□□□ -0.99
TRAF3IP2-212ENST00000532708 C17orf77Q96MU5 243 aa8.88□□□□□ -0.99
TRAF3IP2-212ENST00000532708 NDUFAF3Q9BU61 184 aa8.88□□□□□ -0.99
TRAF3IP2-212ENST00000532708 ZNF688P0C7X2 276 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 ATP6V0CP27449 155 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 AKR1C3P42330 323 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 GALR1P47211 349 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 FAM78BQ5VT40 261 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 SPATA31B1PQ5VZV4 182 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 GATAD1Q8WUU5 269 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 SH3BGRL3Q9H299 93 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 SEPSECSQ9HD40 501 aaKnown RBP8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 KCNIP2Q9NS61 270 aa8.87□□□□□ -0.99
TRAF3IP2-212ENST00000532708 BORCS7-ASMTA0A0B4J1R7 106 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 RPS10P46783 165 aaKnown RBP8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 NDUFA6P56556 154 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 DEFB131AP59861 70 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 GPR82Q96P67 336 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 MAP6D1Q9H9H5 199 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 FRMD6-AS1P0C7T7 363 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 RPL7P18124 248 aaKnown RBP8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 MIR17HGQ75NE6 70 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 MRPL52Q86TS9 123 aaKnown RBP8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 SRD5A3Q9H8P0 318 aa8.86□□□□□ -0.99
TRAF3IP2-212ENST00000532708 MRPS12O15235 138 aaKnown RBP8.85□□□□□ -0.99
TRAF3IP2-212ENST00000532708 IGFL4Q6B9Z1 124 aa8.85□□□□□ -0.99
TRAF3IP2-212ENST00000532708 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.85□□□□□ -0.99
TRAF3IP2-212ENST00000532708 BPIFA4PQ86YQ2 179 aa8.85□□□□□ -0.99
TRAF3IP2-212ENST00000532708 TIMM9Q9Y5J7 89 aa8.85□□□□□ -0.99
TRAF3IP2-212ENST00000532708 H3BTX0 84 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 JOSD1Q15040 202 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 KHDC3LQ587J8 217 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 ACTR3CQ9C0K3 210 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 RNF24Q9Y225 148 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 AGRNO00468 2067 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 RBMY1BA6NDE4 496 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 RBMY1EA6NEQ0 496 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 SOCS3O14543 225 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 RBMY1DP0C7P1 496 aaKnown RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 GAGE1Q13065 139 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 ACOT6Q3I5F7 207 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 CDPF1Q6NVV7 123 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BHQ93079 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 C16orf92Q96LL3 132 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BNQ99877 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 HIST1H2BMQ99879 126 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 ASCL2Q99929 193 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 FAM110AQ9BQ89 295 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 FUT9Q9Y231 359 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 TGP01266 2768 aa8.84□□□□□ -0.99
TRAF3IP2-212ENST00000532708 COL7A1Q02388 2944 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 A8MZ25 164 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 H3BQ15 152 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 PYYP10082 97 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 CMC4P56277 68 aaPredicted RBP8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 DEFB1P60022 68 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 SNRPD3P62318 126 aaKnown RBP8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 SOHLH1Q5JUK2 328 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 OR10G4Q8NGN3 311 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 OR10G9Q8NGN4 311 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 OR10G7Q8NGN6 311 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 OR2G3Q8NGZ4 309 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 GNPNAT1Q96EK6 184 aaPredicted RBP8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 FAM167A-AS1Q96KT0 104 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 SLC25A2Q9BXI2 301 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 EIF5A2Q9GZV4 153 aaKnown RBP8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 NBEAL2Q6ZNJ1 2754 aa8.83□□□□□ -1
TRAF3IP2-212ENST00000532708 B4DEV8 164 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 IGLC2P0DOY2 106 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 ID1P41134 155 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 ELOBQ15370 118 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 ZNF674Q2M3X9 581 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 RNF182Q8N6D2 247 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 C20orf173Q96LM9 149 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 MRPL32Q9BYC8 188 aaKnown RBP8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 A0A087X0K7 114 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 KNCNA6PVL3 124 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 ISLRO14498 428 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 HMGB3O15347 200 aaKnown RBP8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 LINC00614P0C842 121 aa8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 PRB4P10163 310 aaPredicted RBP8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 RPL35AP18077 110 aaKnown RBP8.82□□□□□ -1
TRAF3IP2-212ENST00000532708 HLA-DMBP28068 263 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms