RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 LRRC20Q8TCA0 184 aa12.66□□□□□ -0.38
SMG1-203ENST00000532700 IGF2BP2-AS1Q96M15 143 aa12.66□□□□□ -0.38
SMG1-203ENST00000532700 WFDC1Q9HC57 220 aa12.66□□□□□ -0.38
SMG1-203ENST00000532700 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 SMIM9A6NGZ8 99 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 ZNF705GA8MUZ8 300 aaPredicted RBP12.65□□□□□ -0.38
SMG1-203ENST00000532700 PRAC2D3DTV9 90 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 CXCL2P19875 107 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 TCTAP57738 103 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 KIR3DS1Q14943 382 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 TNFSF18Q9UNG2 199 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 GOLT1BQ9Y3E0 138 aa12.65□□□□□ -0.38
SMG1-203ENST00000532700 PLAC8L1A1L4L8 177 aa12.64□□□□□ -0.39
SMG1-203ENST00000532700 H3BQ15 152 aa12.64□□□□□ -0.39
SMG1-203ENST00000532700 SPART-AS1P0CW21 52 aa12.64□□□□□ -0.39
SMG1-203ENST00000532700 AZU1P20160 251 aa12.64□□□□□ -0.39
SMG1-203ENST00000532700 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
SMG1-203ENST00000532700 PSG3Q16557 428 aa12.64□□□□□ -0.39
SMG1-203ENST00000532700 LCN15Q6UWW0 184 aa12.64□□□□□ -0.39
SMG1-203ENST00000532700 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
SMG1-203ENST00000532700 HBE1P02100 147 aa12.63□□□□□ -0.39
SMG1-203ENST00000532700 GUK1Q16774 197 aa12.63□□□□□ -0.39
SMG1-203ENST00000532700 GCSAMLQ5JQS6 135 aa12.63□□□□□ -0.39
SMG1-203ENST00000532700 FFAR4Q5NUL3 377 aa12.63□□□□□ -0.39
SMG1-203ENST00000532700 MRPL32Q9BYC8 188 aaKnown RBP12.63□□□□□ -0.39
SMG1-203ENST00000532700 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
SMG1-203ENST00000532700 TIMM9Q9Y5J7 89 aa12.63□□□□□ -0.39
SMG1-203ENST00000532700 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 RNF222A6NCQ9 220 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 SLC50A1Q9BRV3 221 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 NIPSNAP3BQ9BS92 247 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 TMEM14CQ9P0S9 112 aa12.62□□□□□ -0.39
SMG1-203ENST00000532700 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 TMEM189A5PLL7 270 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 G3V3Q6 166 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 ARPC5O15511 151 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 DUSP14O95147 198 aaKnown RBP12.61□□□□□ -0.39
SMG1-203ENST00000532700 INSP01308 110 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 HTN3P15516 51 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 ACOT6Q3I5F7 207 aaPredicted RBP12.61□□□□□ -0.39
SMG1-203ENST00000532700 Q6ZNX1 250 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 RPUSD4Q96CM3 377 aaKnown RBP12.61□□□□□ -0.39
SMG1-203ENST00000532700 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
SMG1-203ENST00000532700 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
SMG1-203ENST00000532700 TAAR5O14804 337 aa12.6□□□□□ -0.39
SMG1-203ENST00000532700 RHOBP62745 196 aa12.6□□□□□ -0.39
SMG1-203ENST00000532700 MIR17HGQ75NE6 70 aa12.6□□□□□ -0.39
SMG1-203ENST00000532700 SAT2Q96F10 170 aaPredicted RBP12.6□□□□□ -0.39
SMG1-203ENST00000532700 TMEM208Q9BTX3 173 aa12.6□□□□□ -0.39
SMG1-203ENST00000532700 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
SMG1-203ENST00000532700 HIST1H1EP10412 219 aaKnown RBP12.59□□□□□ -0.39
SMG1-203ENST00000532700 HSD17B11Q8NBQ5 300 aa12.59□□□□□ -0.39
SMG1-203ENST00000532700 PSMG3Q9BT73 122 aaPredicted RBP12.59□□□□□ -0.39
SMG1-203ENST00000532700 NDUFAF3Q9BU61 184 aa12.59□□□□□ -0.39
SMG1-203ENST00000532700 SLC25A2Q9BXI2 301 aa12.59□□□□□ -0.39
SMG1-203ENST00000532700 DNAH2Q9P225 4427 aa12.59□□□□□ -0.39
SMG1-203ENST00000532700 ZNF253O75346 499 aa12.58□□□□□ -0.4
SMG1-203ENST00000532700 M6PRP20645 277 aa12.58□□□□□ -0.4
SMG1-203ENST00000532700 TAS2R45P59539 299 aa12.58□□□□□ -0.4
SMG1-203ENST00000532700 OR2G3Q8NGZ4 309 aa12.58□□□□□ -0.4
SMG1-203ENST00000532700 GNPNAT1Q96EK6 184 aaPredicted RBP12.58□□□□□ -0.4
SMG1-203ENST00000532700 ZNF586Q9NXT0 402 aa12.58□□□□□ -0.4
SMG1-203ENST00000532700 FAT2Q9NYQ8 4349 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 TRBV19A0A075B6N1 114 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 A0A1W2PPV4 95 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 HMSDA8MTL9 139 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 MBP02144 154 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 ATP6V0CP27449 155 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 SERF2P84101 59 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 PDE6HQ13956 83 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 RPL7L1Q6DKI1 246 aaKnown RBP12.57□□□□□ -0.4
SMG1-203ENST00000532700 TMEM88Q6PEY1 159 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 FAM167A-AS1Q96KT0 104 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 PAXXQ9BUH6 204 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
SMG1-203ENST00000532700 M0R2N4 97 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 PYYP10082 97 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 DAD1P61803 113 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 ZNF345Q14585 488 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 OR10G4Q8NGN3 311 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 OR10G9Q8NGN4 311 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 OR10G7Q8NGN6 311 aa12.56□□□□□ -0.4
SMG1-203ENST00000532700 OR7C2O60412 319 aa12.55□□□□□ -0.4
SMG1-203ENST00000532700 NDUFB4O95168 129 aa12.55□□□□□ -0.4
SMG1-203ENST00000532700 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
SMG1-203ENST00000532700 RNF141Q8WVD5 230 aa12.55□□□□□ -0.4
SMG1-203ENST00000532700 A0A0D9SG52 128 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 M0R3E3 92 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 NBEAP1P0C6P0 100 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 CT45A10P0DMU9 189 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 DEFB130BP0DP73 79 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 DEFB130AP0DP74 79 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 HTN1P15515 57 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 RAB2AP61019 212 aa12.54□□□□□ -0.4
SMG1-203ENST00000532700 GFI1BQ5VTD9 330 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms