RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ZNF705FA8MVS1 300 aaPredicted RBP16.38■□□□□ 0.21
LRRK1-208ENST00000532029 IGKV3-20P01619 116 aa16.38■□□□□ 0.21
LRRK1-208ENST00000532029 NUTF2P61970 127 aaKnown RBP16.38■□□□□ 0.21
LRRK1-208ENST00000532029 ZNF726P1Q15940 193 aa16.38■□□□□ 0.21
LRRK1-208ENST00000532029 SSX7Q7RTT5 188 aa16.38■□□□□ 0.21
LRRK1-208ENST00000532029 EXOC3-AS1Q8N2X6 119 aa16.38■□□□□ 0.21
LRRK1-208ENST00000532029 MRPL53Q96EL3 112 aaKnown RBP16.38■□□□□ 0.21
LRRK1-208ENST00000532029 CA1P00915 261 aaPredicted RBP16.37■□□□□ 0.21
LRRK1-208ENST00000532029 GCHFRP30047 84 aa16.37■□□□□ 0.21
LRRK1-208ENST00000532029 RANP62826 216 aaKnown RBP16.37■□□□□ 0.21
LRRK1-208ENST00000532029 HIST1H1AQ02539 215 aaPredicted RBP16.37■□□□□ 0.21
LRRK1-208ENST00000532029 ICAM4Q14773 271 aa16.37■□□□□ 0.21
LRRK1-208ENST00000532029 IQCF2Q8IXL9 164 aa16.37■□□□□ 0.21
LRRK1-208ENST00000532029 LYPD1Q8N2G4 141 aa16.37■□□□□ 0.21
LRRK1-208ENST00000532029 OR8A1Q8NGG7 326 aa16.37■□□□□ 0.21
LRRK1-208ENST00000532029 ZNF705DP0CH99 300 aaPredicted RBP16.36■□□□□ 0.21
LRRK1-208ENST00000532029 ZNF705BP0CI00 300 aaPredicted RBP16.36■□□□□ 0.21
LRRK1-208ENST00000532029 DPPA3Q6W0C5 159 aa16.36■□□□□ 0.21
LRRK1-208ENST00000532029 FAM213BQ8TBF2 198 aa16.36■□□□□ 0.21
LRRK1-208ENST00000532029 CLUHP3Q96NS8 147 aa16.36■□□□□ 0.21
LRRK1-208ENST00000532029 Q9H3A6 140 aa16.36■□□□□ 0.21
LRRK1-208ENST00000532029 TMEM167BQ9NRX6 74 aa16.36■□□□□ 0.21
LRRK1-208ENST00000532029 PLA2G2EQ9NZK7 142 aa16.36■□□□□ 0.21
LRRK1-208ENST00000532029 MAP1LC3B2A6NCE7 125 aa16.35■□□□□ 0.21
LRRK1-208ENST00000532029 M0R3E3 92 aa16.35■□□□□ 0.21
LRRK1-208ENST00000532029 CNN1P51911 297 aaKnown RBP16.35■□□□□ 0.21
LRRK1-208ENST00000532029 Q6ZWC4 215 aa16.35■□□□□ 0.21
LRRK1-208ENST00000532029 OR10J6PQ8NGY7 276 aa16.35■□□□□ 0.21
LRRK1-208ENST00000532029 MAP1LC3BQ9GZQ8 125 aa16.35■□□□□ 0.21
LRRK1-208ENST00000532029 PRB4P10163 310 aaPredicted RBP16.34■□□□□ 0.21
LRRK1-208ENST00000532029 FHITP49789 147 aa16.34■□□□□ 0.21
LRRK1-208ENST00000532029 DEFB135Q30KP9 77 aa16.34■□□□□ 0.21
LRRK1-208ENST00000532029 FAM74A1Q5RGS3 127 aa16.34■□□□□ 0.21
LRRK1-208ENST00000532029 RETNQ9HD89 108 aa16.34■□□□□ 0.21
LRRK1-208ENST00000532029 PPP1R14DQ9NXH3 145 aa16.34■□□□□ 0.21
LRRK1-208ENST00000532029 TGP01266 2768 aa16.33■□□□□ 0.21
LRRK1-208ENST00000532029 PRAC2D3DTV9 90 aa16.33■□□□□ 0.2
LRRK1-208ENST00000532029 CSN1S1P47710 185 aa16.33■□□□□ 0.2
LRRK1-208ENST00000532029 RAB5CP51148 216 aa16.33■□□□□ 0.2
LRRK1-208ENST00000532029 FGF8P55075 233 aaPredicted RBP16.33■□□□□ 0.2
LRRK1-208ENST00000532029 C1QTNF4Q9BXJ3 329 aa16.33■□□□□ 0.2
LRRK1-208ENST00000532029 OTORQ9NRC9 128 aa16.33■□□□□ 0.2
LRRK1-208ENST00000532029 A8MTW9 85 aa16.32■□□□□ 0.2
LRRK1-208ENST00000532029 SUN5Q8TC36 379 aa16.32■□□□□ 0.2
LRRK1-208ENST00000532029 RCHY1Q96PM5 261 aa16.32■□□□□ 0.2
LRRK1-208ENST00000532029 PGPA6NDG6 321 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 SPRY2O43597 315 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 CMTM2Q8TAZ6 248 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 RXFP4Q8TDU9 374 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 TP53TG1Q9Y2A0 90 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 BOLA1Q9Y3E2 137 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 U3KQK5 164 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 AGRNO00468 2067 aa16.31■□□□□ 0.2
LRRK1-208ENST00000532029 SULT1A2P50226 295 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 FXYD7P58549 80 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 SFT2D1Q8WV19 159 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 MBD3L1Q8WWY6 194 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 RNF183Q96D59 192 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 SLC35B3Q9H1N7 401 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 TMPRSS5Q9H3S3 457 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 XCL2Q9UBD3 114 aa16.3■□□□□ 0.2
LRRK1-208ENST00000532029 GIG44P09565 113 aaPredicted RBP16.29■□□□□ 0.2
LRRK1-208ENST00000532029 H2AFB1P0C5Y9 115 aa16.29■□□□□ 0.2
LRRK1-208ENST00000532029 AMTNQ6UX39 209 aa16.29■□□□□ 0.2
LRRK1-208ENST00000532029 OVOL2Q9BRP0 275 aa16.29■□□□□ 0.2
LRRK1-208ENST00000532029 DNAH9Q9NYC9 4486 aa16.29■□□□□ 0.2
LRRK1-208ENST00000532029 NPIPB6E9PJ23 425 aa16.28■□□□□ 0.2
LRRK1-208ENST00000532029 BOLA2-SMG1P6H3BVE0 249 aa16.28■□□□□ 0.2
LRRK1-208ENST00000532029 AMBPP02760 352 aa16.28■□□□□ 0.2
LRRK1-208ENST00000532029 IGKV2-40A0A087WW87 121 aaPredicted RBP16.27■□□□□ 0.2
LRRK1-208ENST00000532029 IGKV2D-40P01614 121 aaPredicted RBP16.27■□□□□ 0.2
LRRK1-208ENST00000532029 SLC25A5P05141 298 aaKnown RBP16.27■□□□□ 0.2
LRRK1-208ENST00000532029 RPH3ALQ9UNE2 315 aa16.27■□□□□ 0.2
LRRK1-208ENST00000532029 A0A1B0GV50 99 aa16.26■□□□□ 0.19
LRRK1-208ENST00000532029 A0A1W2PRE2 83 aa16.26■□□□□ 0.19
LRRK1-208ENST00000532029 UBE2G2P60604 165 aa16.26■□□□□ 0.19
LRRK1-208ENST00000532029 ERCC8Q13216 396 aa16.26■□□□□ 0.19
LRRK1-208ENST00000532029 SPINK13Q1W4C9 94 aa16.26■□□□□ 0.19
LRRK1-208ENST00000532029 LINC00477Q96M19 166 aa16.26■□□□□ 0.19
LRRK1-208ENST00000532029 DIRC3C9JPN6 131 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 TEX46H3BTG2 121 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 M0R2Z0 102 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 TSPOP30536 169 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 SUMO1P63165 101 aaKnown RBP16.25■□□□□ 0.19
LRRK1-208ENST00000532029 TMEM78Q5T7P6 136 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 ALKAL2Q6UX46 152 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 ARL6IP6Q8N6S5 226 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 C5orf17Q8NAS9 161 aa16.25■□□□□ 0.19
LRRK1-208ENST00000532029 RBAKDNA6NC62 111 aa16.24■□□□□ 0.19
LRRK1-208ENST00000532029 C9orf47Q6ZRZ4 202 aa16.24■□□□□ 0.19
LRRK1-208ENST00000532029 ODF3Q96PU9 254 aa16.24■□□□□ 0.19
LRRK1-208ENST00000532029 RARRES2Q99969 163 aa16.24■□□□□ 0.19
LRRK1-208ENST00000532029 AGPAT4-IT1Q9H0P7 198 aa16.24■□□□□ 0.19
LRRK1-208ENST00000532029 GGTLC3B5MD39 225 aa16.23■□□□□ 0.19
LRRK1-208ENST00000532029 CT45A10P0DMU9 189 aa16.23■□□□□ 0.19
LRRK1-208ENST00000532029 LEPP41159 167 aa16.23■□□□□ 0.19
LRRK1-208ENST00000532029 CDKN1BP46527 198 aa16.23■□□□□ 0.19
LRRK1-208ENST00000532029 CSNK1G2-AS1Q8NCQ2 148 aa16.23■□□□□ 0.19
LRRK1-208ENST00000532029 OR11H2Q8NH07 326 aa16.23■□□□□ 0.19
LRRK1-208ENST00000532029 IGF2BP2-AS1Q96M15 143 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms