RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 LY96Q9Y6Y9 160 aa6.29□□□□□ -1.4
NEDD8-206ENST00000531430 LINC00854A0A1B0GVQ3 168 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 DUXBA0A1W2PPF3 345 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 PRSS46E5RG02 174 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 ZNF324O75467 553 aaPredicted RBP6.28□□□□□ -1.4
NEDD8-206ENST00000531430 EVI2AP22794 236 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 RNASE4P34096 147 aaKnown RBP6.28□□□□□ -1.4
NEDD8-206ENST00000531430 SLC38A11Q08AI6 406 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 CTF1Q16619 201 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 TMEM128Q5BJH2 165 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 BPIFA4PQ86YQ2 179 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 NPVFQ9HCQ7 196 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 MSRB1Q9NZV6 116 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 RNF24Q9Y225 148 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 KLF12Q9Y4X4 402 aa6.28□□□□□ -1.4
NEDD8-206ENST00000531430 SLC17A3O00476 420 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 CTDSPLO15194 276 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 SSSCA1O60232 199 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 COX7A2P2O60397 106 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 CCNKO75909 580 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 SCGB1D2O95969 90 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 METTL15P1P0C7V9 234 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 SLC25A6P12236 298 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 PLP1P60201 277 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 ZNF415Q09FC8 603 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 ERCC8Q13216 396 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 MRPL23Q16540 153 aaKnown RBP6.27□□□□□ -1.41
NEDD8-206ENST00000531430 MCFD2Q8NI22 146 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 MRPL16Q9NX20 251 aaKnown RBP6.27□□□□□ -1.41
NEDD8-206ENST00000531430 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
NEDD8-206ENST00000531430 RSL24D1Q9UHA3 163 aaKnown RBP6.27□□□□□ -1.41
NEDD8-206ENST00000531430 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 TRAV5A0A0B4J249 113 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 TRGV4A0A0C4DH28 118 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 FABP12A6NFH5 140 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 RGS13O14921 159 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 MRPS12O15235 138 aaKnown RBP6.26□□□□□ -1.41
NEDD8-206ENST00000531430 SFT2D2O95562 160 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 CXCL2P19875 107 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 FAUP35544 74 aaKnown RBP6.26□□□□□ -1.41
NEDD8-206ENST00000531430 BTN1A1Q13410 526 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 TEPPQ6URK8 271 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 NEGR1Q7Z3B1 354 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 WFDC10BQ8IUB3 73 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 EIF4E3Q8N5X7 224 aaKnown RBP6.26□□□□□ -1.41
NEDD8-206ENST00000531430 ZNF680Q8NEM1 530 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 OR10P1Q8NGE3 313 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 PRO0255Q9UI72 69 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 PXMP4Q9Y6I8 212 aa6.26□□□□□ -1.41
NEDD8-206ENST00000531430 C7orf71A4D174 169 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 H3BQ15 152 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 AGPAT2O15120 278 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 SPINK4O60575 86 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 MPDU1O75352 247 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 SLC25A5P05141 298 aaKnown RBP6.25□□□□□ -1.41
NEDD8-206ENST00000531430 GPX1P07203 203 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 CRYGDP07320 174 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 SRIP30626 198 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 CRYBA4P53673 196 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 CD300CQ08708 224 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 SLAQ13239 276 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 PPP1R1AQ13522 171 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 OPCMLQ14982 345 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 SPCS2Q15005 226 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 C10orf113Q5VZT2 155 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 LRTM2Q8N967 370 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 RAB2BQ8WUD1 216 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 PCNPQ8WW12 178 aaKnown RBP6.25□□□□□ -1.41
NEDD8-206ENST00000531430 RABL2AQ9UBK7 228 aaPredicted RBP6.25□□□□□ -1.41
NEDD8-206ENST00000531430 TP53TG3Q9ULZ0 132 aa6.25□□□□□ -1.41
NEDD8-206ENST00000531430 PLA2G1BP04054 148 aaKnown RBP6.24□□□□□ -1.41
NEDD8-206ENST00000531430 GYPEP15421 78 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 ID3Q02535 119 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 FHL2Q14192 279 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 PYDC2Q56P42 97 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 PXDC1Q5TGL8 231 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 MORN5Q5VZ52 161 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 Q6ZRG5 221 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 ZNF546Q86UE3 836 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 TOMM5Q8N4H5 51 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 C11orf72Q8NBR9 251 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 SYT8Q8NBV8 401 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 TMEM37Q8WXS4 190 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 ST6GAL2Q96JF0 529 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 SMIM8Q96KF7 97 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 ARPC5LQ9BPX5 153 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 LINC00467Q9BRT7 94 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 Q9HAA7 133 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 DNAJC4Q9NNZ3 241 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 FAM30AQ9NZY2 134 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 GSKIPQ9P0R6 139 aa6.24□□□□□ -1.41
NEDD8-206ENST00000531430 M0R3E3 92 aa6.23□□□□□ -1.41
NEDD8-206ENST00000531430 SFTA3P0C7M3 94 aa6.23□□□□□ -1.41
NEDD8-206ENST00000531430 TCL1AP56279 114 aa6.23□□□□□ -1.41
NEDD8-206ENST00000531430 BLNKQ8WV28 456 aa6.23□□□□□ -1.41
NEDD8-206ENST00000531430 SAT2Q96F10 170 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-206ENST00000531430 LINC00477Q96M19 166 aa6.23□□□□□ -1.41
NEDD8-206ENST00000531430 SOSTQ9BQB4 213 aa6.23□□□□□ -1.41
NEDD8-206ENST00000531430 TMEM70Q9BUB7 260 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms