RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 RNF182Q8N6D2 247 aa13.01□□□□□ -0.33
PTPN11-204ENST00000531326 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
PTPN11-204ENST00000531326 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
PTPN11-204ENST00000531326 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
PTPN11-204ENST00000531326 TRBV19A0A075B6N1 114 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 OR7C2O60412 319 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 NDUFB4O95168 129 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 TAS2R45P59539 299 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 KHDC3LQ587J8 217 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 BAP18Q8IXM2 172 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 LRRC20Q8TCA0 184 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 RNF141Q8WVD5 230 aa13□□□□□ -0.33
PTPN11-204ENST00000531326 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
PTPN11-204ENST00000531326 ZNF253O75346 499 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 OR10J4P0C629 311 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 SEC11BP0C7V7 166 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 TPT1P13693 172 aaKnown RBP12.99□□□□□ -0.33
PTPN11-204ENST00000531326 NKX2-5P52952 324 aaPredicted RBP12.99□□□□□ -0.33
PTPN11-204ENST00000531326 EIF5AP63241 154 aaKnown RBP12.99□□□□□ -0.33
PTPN11-204ENST00000531326 ZNF726P1Q15940 193 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 ACTL10Q5JWF8 245 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 AKR1C8PQ5T2L2 129 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 SSX7Q7RTT5 188 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 TRPT1Q86TN4 253 aaKnown RBP12.99□□□□□ -0.33
PTPN11-204ENST00000531326 OR11H2Q8NH07 326 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 RAB24Q969Q5 203 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 C11orf68Q9H3H3 251 aaKnown RBP12.99□□□□□ -0.33
PTPN11-204ENST00000531326 AGRNO00468 2067 aa12.99□□□□□ -0.33
PTPN11-204ENST00000531326 F6UB75 175 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 STAG3L2P0CL84 134 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 STAG3L3P0CL85 134 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 PDE6HQ13956 83 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 PSG3Q16557 428 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 PQLC2Q6ZP29 291 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 C11orf45Q8TAV5 145 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
PTPN11-204ENST00000531326 ACTR3CQ9C0K3 210 aaPredicted RBP12.98□□□□□ -0.33
PTPN11-204ENST00000531326 SAV1Q9H4B6 383 aaPredicted RBP12.98□□□□□ -0.33
PTPN11-204ENST00000531326 H3BMM0 161 aa12.97□□□□□ -0.33
PTPN11-204ENST00000531326 DEFB4AO15263 64 aa12.97□□□□□ -0.33
PTPN11-204ENST00000531326 HLA-DRB4P13762 266 aa12.97□□□□□ -0.33
PTPN11-204ENST00000531326 UBE2L3P68036 154 aaKnown RBP12.97□□□□□ -0.33
PTPN11-204ENST00000531326 SLC51BQ86UW2 128 aa12.97□□□□□ -0.33
PTPN11-204ENST00000531326 STHQ8IWL8 128 aa12.97□□□□□ -0.33
PTPN11-204ENST00000531326 HLA-DRB4X5D2U9 266 aa12.97□□□□□ -0.33
PTPN11-204ENST00000531326 HECTD4Q9Y4D8 3996 aa12.97□□□□□ -0.33
PTPN11-204ENST00000531326 A0A0J9YX75 114 aa12.96□□□□□ -0.33
PTPN11-204ENST00000531326 CA1P00915 261 aaPredicted RBP12.96□□□□□ -0.33
PTPN11-204ENST00000531326 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
PTPN11-204ENST00000531326 ZNF738Q8NE65 137 aa12.96□□□□□ -0.33
PTPN11-204ENST00000531326 TMED6Q8WW62 240 aa12.96□□□□□ -0.33
PTPN11-204ENST00000531326 PHYHIPLQ96FC7 376 aa12.96□□□□□ -0.33
PTPN11-204ENST00000531326 DNAH6Q9C0G6 4158 aa12.96□□□□□ -0.34
PTPN11-204ENST00000531326 CTXND1A0A1B0GTU2 59 aa12.95□□□□□ -0.34
PTPN11-204ENST00000531326 ZNF705FA8MVS1 300 aaPredicted RBP12.95□□□□□ -0.34
PTPN11-204ENST00000531326 PRB4P10163 310 aaPredicted RBP12.95□□□□□ -0.34
PTPN11-204ENST00000531326 FHITP49789 147 aa12.95□□□□□ -0.34
PTPN11-204ENST00000531326 PSG9Q00887 426 aa12.95□□□□□ -0.34
PTPN11-204ENST00000531326 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
PTPN11-204ENST00000531326 UMAD1C9J7I0 102 aa12.94□□□□□ -0.34
PTPN11-204ENST00000531326 C4BPBP20851 252 aa12.94□□□□□ -0.34
PTPN11-204ENST00000531326 GCHFRP30047 84 aa12.94□□□□□ -0.34
PTPN11-204ENST00000531326 EBLN2Q6P2I7 272 aa12.94□□□□□ -0.34
PTPN11-204ENST00000531326 EXOC3-AS1Q8N2X6 119 aa12.94□□□□□ -0.34
PTPN11-204ENST00000531326 SUN5Q8TC36 379 aa12.94□□□□□ -0.34
PTPN11-204ENST00000531326 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
PTPN11-204ENST00000531326 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
PTPN11-204ENST00000531326 A8MTW9 85 aa12.93□□□□□ -0.34
PTPN11-204ENST00000531326 PRAC2D3DTV9 90 aa12.93□□□□□ -0.34
PTPN11-204ENST00000531326 M0R3E3 92 aa12.93□□□□□ -0.34
PTPN11-204ENST00000531326 GIG44P09565 113 aaPredicted RBP12.93□□□□□ -0.34
PTPN11-204ENST00000531326 ZNF705DP0CH99 300 aaPredicted RBP12.93□□□□□ -0.34
PTPN11-204ENST00000531326 ZNF705BP0CI00 300 aaPredicted RBP12.93□□□□□ -0.34
PTPN11-204ENST00000531326 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
PTPN11-204ENST00000531326 CLUHP3Q96NS8 147 aa12.93□□□□□ -0.34
PTPN11-204ENST00000531326 CXorf1O96002 111 aa12.92□□□□□ -0.34
PTPN11-204ENST00000531326 CNN1P51911 297 aaKnown RBP12.92□□□□□ -0.34
PTPN11-204ENST00000531326 RANP62826 216 aaKnown RBP12.92□□□□□ -0.34
PTPN11-204ENST00000531326 ICAM4Q14773 271 aa12.92□□□□□ -0.34
PTPN11-204ENST00000531326 Q8NAQ8 132 aa12.92□□□□□ -0.34
PTPN11-204ENST00000531326 OR8A1Q8NGG7 326 aa12.92□□□□□ -0.34
PTPN11-204ENST00000531326 C2CD4CQ8TF44 421 aa12.92□□□□□ -0.34
PTPN11-204ENST00000531326 PRELID1Q9Y255 219 aa12.92□□□□□ -0.34
PTPN11-204ENST00000531326 MAP1LC3B2A6NCE7 125 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 FGF8P55075 233 aaPredicted RBP12.91□□□□□ -0.34
PTPN11-204ENST00000531326 MORN3Q6PF18 240 aaPredicted RBP12.91□□□□□ -0.34
PTPN11-204ENST00000531326 DPPA3Q6W0C5 159 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 LYPD1Q8N2G4 141 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 OR4B1Q8NGF8 309 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 FAM213BQ8TBF2 198 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 MAP1LC3BQ9GZQ8 125 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 Q9H3A6 140 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 AAMDCQ9H7C9 122 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 APLNQ9ULZ1 77 aa12.91□□□□□ -0.34
PTPN11-204ENST00000531326 KIAA1109Q2LD37 5005 aa12.9□□□□□ -0.34
PTPN11-204ENST00000531326 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms