RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 FGL1Q08830 312 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 PSG3Q16557 428 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 RNASE10Q5GAN6 216 aaKnown RBP5.4□□□□□ -1.54
CD44-232ENST00000531118 NOXA1Q86UR1 476 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 C11orf72Q8NBR9 251 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 OR4D5Q8NGN0 318 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 ST6GAL2Q96JF0 529 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 GPR82Q96P67 336 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 DNAJC4Q9NNZ3 241 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 CACNG5Q9UF02 275 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 SLC45A2Q9UMX9 530 aa5.4□□□□□ -1.54
CD44-232ENST00000531118 C3orf85A0A1B0GTC6 90 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 CCDC160A6NGH7 325 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 SNRPGP15A8MWD9 76 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 IBA57-AS1B1ANH7 110 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 GABARAPH6UMI1 98 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 K7EQD1 137 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 PIGPP57054 158 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 TAS2R19P59542 299 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 ZNF415Q09FC8 603 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 MEF2DQ14814 521 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 LELP1Q5T871 98 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 FAM219AQ8IW50 185 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 ZNF680Q8NEM1 530 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 ZFAND1Q8TCF1 268 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 RBPMSQ93062 196 aaKnown RBP5.39□□□□□ -1.55
CD44-232ENST00000531118 ZNF486Q96H40 463 aaPredicted RBP5.39□□□□□ -1.55
CD44-232ENST00000531118 DIRAS2Q96HU8 199 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 TRGV9Q99603 122 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 VGLL1Q99990 258 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 GSN-AS1Q9NRJ2 163 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 CCDC59Q9P031 241 aaKnown RBP5.39□□□□□ -1.55
CD44-232ENST00000531118 MTFP1Q9UDX5 166 aa5.39□□□□□ -1.55
CD44-232ENST00000531118 IGKV1OR2-108A0A075B7D4 117 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 A0A087X0K7 114 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 H3BRN7 92 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 J3KRW8 73 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 LECT2O14960 151 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 PRAF2O60831 178 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 B3GALNT1O75752 331 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 RAB3DO95716 219 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 CD3DP04234 171 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 GATA2P23769 480 aaPredicted RBP5.38□□□□□ -1.55
CD44-232ENST00000531118 IL18Q14116 193 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 SPCS2Q15005 226 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 ACOT6Q3I5F7 207 aaPredicted RBP5.38□□□□□ -1.55
CD44-232ENST00000531118 SP6Q3SY56 376 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 LINC01556Q5JQF7 62 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 CCDC190Q86UF4 302 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 CCDC71LQ8N9Z2 235 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 TMEM229BQ8NBD8 167 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 OR52I2Q8NH67 350 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 TERB2Q8NHR7 220 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 DYNC2LI1Q8TCX1 351 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 PCNPQ8WW12 178 aaKnown RBP5.38□□□□□ -1.55
CD44-232ENST00000531118 RPUSD4Q96CM3 377 aaKnown RBP5.38□□□□□ -1.55
CD44-232ENST00000531118 PYGO2Q9BRQ0 406 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 MLST8Q9BVC4 326 aa5.38□□□□□ -1.55
CD44-232ENST00000531118 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.38□□□□□ -1.55
CD44-232ENST00000531118 RSL24D1Q9UHA3 163 aaKnown RBP5.38□□□□□ -1.55
CD44-232ENST00000531118 IGHV3-38A0A0C4DH36 116 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 DISC1C4P0D8 188 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 CTDSP2O14595 271 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 CTDSPLO15194 276 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 SPINK4O60575 86 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 CCNKO75909 580 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 S100A5P33763 92 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 TCL1AP56279 114 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 SLAQ13239 276 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 SCGB2B2Q4G0G5 96 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 STEAP1BQ6NZ63 245 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 Q6ZRU5 148 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 THAP8Q8NA92 274 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 MCFD2Q8NI22 146 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 LHFPL5Q8TAF8 219 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 TMEM37Q8WXS4 190 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 SCGB3A2Q96PL1 93 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 TMEM147Q9BVK8 224 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 MRPL16Q9NX20 251 aaKnown RBP5.37□□□□□ -1.55
CD44-232ENST00000531118 COPZ2Q9P299 210 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 C14orf166Q9Y224 244 aaKnown RBP5.37□□□□□ -1.55
CD44-232ENST00000531118 TMEM56-RWDD3S4R434 201 aa5.37□□□□□ -1.55
CD44-232ENST00000531118 TRAV12-3A0A0B4J271 114 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 LINC00854A0A1B0GVQ3 168 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 FABP12A6NFH5 140 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 E5RGE8 158 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 H3BMQ9 156 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 CFDP00746 253 aaPredicted RBP5.36□□□□□ -1.55
CD44-232ENST00000531118 AKAIN1P0CW23 69 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 FAUP35544 74 aaKnown RBP5.36□□□□□ -1.55
CD44-232ENST00000531118 GPX4P36969 197 aaPredicted RBP5.36□□□□□ -1.55
CD44-232ENST00000531118 AP3S2P59780 193 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 FHL2Q14192 279 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 LAGE3Q14657 143 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 SURF2Q15527 256 aaPredicted RBP5.36□□□□□ -1.55
CD44-232ENST00000531118 TDRG1Q3Y452 100 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 MORN5Q5VZ52 161 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 LGI3Q8N145 548 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 DTD1Q8TEA8 209 aa5.36□□□□□ -1.55
CD44-232ENST00000531118 SMIM4Q8WVI0 70 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms