RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 ZNF431Q8TF32 576 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-214ENST00000531043 RAB2BQ8WUD1 216 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 SMIM8Q96KF7 97 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 SLC25A21Q9BQT8 299 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-214ENST00000531043 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 V9GYH0 126 aa9.08□□□□□ -0.96
HIF3A-214ENST00000531043 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 C9orf170A2RU37 121 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 IGLC2P0DOY2 106 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
HIF3A-214ENST00000531043 Q5VSD8 79 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 TEPPQ6URK8 271 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 SAT2Q96F10 170 aaPredicted RBP9.07□□□□□ -0.96
HIF3A-214ENST00000531043 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 NPVFQ9HCQ7 196 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 FLVCR2Q9UPI3 526 aa9.07□□□□□ -0.96
HIF3A-214ENST00000531043 H3BMQ9 156 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 AGPAT2O15120 278 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 SIVA1O15304 175 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 NXPH4O95158 308 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 TMBIM6P55061 237 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 HAMPP81172 84 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 ERCC8Q13216 396 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 Q6ZQT7 251 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 MGST2Q99735 147 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
HIF3A-214ENST00000531043 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 TRGV1A0A0A0MS02 117 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 NPIPB6E9PJ23 425 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 FNDC10F2Z333 226 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 GOSR2O14653 212 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 SCGB1D2O95969 90 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 LEPP41159 167 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 AP3S2P59780 193 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 CD300CQ08708 224 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 BPIFA4PQ86YQ2 179 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 OR10P1Q8NGE3 313 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 MDFICQ9P1T7 246 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 RCL1Q9Y2P8 373 aaKnown RBP9.05□□□□□ -0.96
HIF3A-214ENST00000531043 KLF12Q9Y4X4 402 aa9.05□□□□□ -0.96
HIF3A-214ENST00000531043 M0R3E3 92 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 SMR3BP02814 79 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-214ENST00000531043 BTN1A1Q13410 526 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 ZNF546Q86UE3 836 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 ODF3Q96PU9 254 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 PYGO2Q9BRQ0 406 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 FUT9Q9Y231 359 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 PXMP4Q9Y6I8 212 aa9.04□□□□□ -0.96
HIF3A-214ENST00000531043 A0A087WTM6 91 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 C7orf71A4D174 169 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 PAX4O43316 350 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 ZNF324O75467 553 aaPredicted RBP9.03□□□□□ -0.96
HIF3A-214ENST00000531043 ERVFC1-1P60608 527 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 UBE2MP61081 183 aaKnown RBP9.03□□□□□ -0.96
HIF3A-214ENST00000531043 PXDC1Q5TGL8 231 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 MIC13Q5XKP0 118 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 S100A7AQ86SG5 101 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 BCL7BQ9BQE9 202 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
HIF3A-214ENST00000531043 TSC22D2O75157 780 aa9.02□□□□□ -0.97
HIF3A-214ENST00000531043 IAH1Q2TAA2 248 aaPredicted RBP9.02□□□□□ -0.97
HIF3A-214ENST00000531043 PRR9Q5T870 116 aa9.02□□□□□ -0.97
HIF3A-214ENST00000531043 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
HIF3A-214ENST00000531043 C18orf15Q96N68 181 aa9.02□□□□□ -0.97
HIF3A-214ENST00000531043 MRPL16Q9NX20 251 aaKnown RBP9.02□□□□□ -0.97
HIF3A-214ENST00000531043 GSKIPQ9P0R6 139 aa9.02□□□□□ -0.97
HIF3A-214ENST00000531043 C7orf66A4D0T2 115 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 KLLNB2CW77 178 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 SPINK4O60575 86 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 NDUFB6O95139 128 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 NDUFB4O95168 129 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 MBPP02686 304 aaPredicted RBP9.01□□□□□ -0.97
HIF3A-214ENST00000531043 SLC25A5P05141 298 aaKnown RBP9.01□□□□□ -0.97
HIF3A-214ENST00000531043 OR4E1P0C645 316 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 RNASE4P34096 147 aaKnown RBP9.01□□□□□ -0.97
HIF3A-214ENST00000531043 CDPF1Q6NVV7 123 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 LYPD5Q6UWN5 251 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 FRZBQ92765 325 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 FAM19A4Q96LR4 140 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 AGPAT4-IT1Q9H0P7 198 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 DNAJC4Q9NNZ3 241 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 RNF24Q9Y225 148 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 ICOSQ9Y6W8 199 aa9.01□□□□□ -0.97
HIF3A-214ENST00000531043 DNAH8Q96JB1 4490 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 EREGO14944 169 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 PRAF2O60831 178 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 TCL1AP56279 114 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 TAS2R30P59541 319 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 ANXA2RQ3ZCQ2 193 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 C4orf46Q504U0 113 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 NRARPQ7Z6K4 114 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 EIF4E3Q8N5X7 224 aaKnown RBP9□□□□□ -0.97
HIF3A-214ENST00000531043 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 ST6GAL2Q96JF0 529 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 C8orf49Q96NF6 230 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 PTTG2Q9NZH5 202 aa9□□□□□ -0.97
HIF3A-214ENST00000531043 CCSO14618 274 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms