RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 TMEM167BQ9NRX6 74 aa11.8□□□□□ -0.52
BRK1-201ENST00000530758 UBE2CO00762 179 aa11.79□□□□□ -0.52
BRK1-201ENST00000530758 EBLN2Q6P2I7 272 aa11.79□□□□□ -0.52
BRK1-201ENST00000530758 AAMDCQ9H7C9 122 aa11.79□□□□□ -0.52
BRK1-201ENST00000530758 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
BRK1-201ENST00000530758 NHLRC4P0CG21 123 aaPredicted RBP11.78□□□□□ -0.52
BRK1-201ENST00000530758 APOC4P55056 127 aa11.78□□□□□ -0.52
BRK1-201ENST00000530758 DEFB1P60022 68 aa11.78□□□□□ -0.52
BRK1-201ENST00000530758 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
BRK1-201ENST00000530758 MORN3Q6PF18 240 aaPredicted RBP11.78□□□□□ -0.52
BRK1-201ENST00000530758 EXOC3-AS1Q8N2X6 119 aa11.78□□□□□ -0.52
BRK1-201ENST00000530758 ZNF738Q8NE65 137 aa11.78□□□□□ -0.52
BRK1-201ENST00000530758 OR8A1Q8NGG7 326 aa11.78□□□□□ -0.52
BRK1-201ENST00000530758 RPUSD4Q96CM3 377 aaKnown RBP11.78□□□□□ -0.52
BRK1-201ENST00000530758 TM2D3Q9BRN9 247 aa11.78□□□□□ -0.52
BRK1-201ENST00000530758 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
BRK1-201ENST00000530758 TRAV1-1A0A0B4J248 108 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 MAP1LC3B2A6NCE7 125 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 ZNF705FA8MVS1 300 aaPredicted RBP11.77□□□□□ -0.53
BRK1-201ENST00000530758 F6UB75 175 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 DUSP14O95147 198 aaKnown RBP11.77□□□□□ -0.53
BRK1-201ENST00000530758 ICAM4Q14773 271 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 FAM213BQ8TBF2 198 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 MAP1LC3BQ9GZQ8 125 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 Q9H3A6 140 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 OTORQ9NRC9 128 aa11.77□□□□□ -0.53
BRK1-201ENST00000530758 A0A1W2PRE2 83 aa11.76□□□□□ -0.53
BRK1-201ENST00000530758 PRAC2D3DTV9 90 aa11.76□□□□□ -0.53
BRK1-201ENST00000530758 BOLA2-SMG1P6H3BVE0 249 aa11.76□□□□□ -0.53
BRK1-201ENST00000530758 M0R3E3 92 aa11.76□□□□□ -0.53
BRK1-201ENST00000530758 GIG44P09565 113 aaPredicted RBP11.76□□□□□ -0.53
BRK1-201ENST00000530758 RPL35AP18077 110 aaKnown RBP11.76□□□□□ -0.53
BRK1-201ENST00000530758 AMTNQ6UX39 209 aa11.76□□□□□ -0.53
BRK1-201ENST00000530758 Q6ZWC4 215 aa11.76□□□□□ -0.53
BRK1-201ENST00000530758 RXFP4Q8TDU9 374 aa11.76□□□□□ -0.53
BRK1-201ENST00000530758 HUWE1Q7Z6Z7 4374 aaKnown RBP11.76□□□□□ -0.53
BRK1-201ENST00000530758 H2AFB1P0C5Y9 115 aa11.75□□□□□ -0.53
BRK1-201ENST00000530758 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
BRK1-201ENST00000530758 FGF8P55075 233 aaPredicted RBP11.75□□□□□ -0.53
BRK1-201ENST00000530758 NUTF2P61970 127 aaKnown RBP11.75□□□□□ -0.53
BRK1-201ENST00000530758 SFT2D1Q8WV19 159 aa11.75□□□□□ -0.53
BRK1-201ENST00000530758 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
BRK1-201ENST00000530758 RBAKDNA6NC62 111 aa11.74□□□□□ -0.53
BRK1-201ENST00000530758 PGPA6NDG6 321 aa11.74□□□□□ -0.53
BRK1-201ENST00000530758 FAM74A1Q5RGS3 127 aa11.74□□□□□ -0.53
BRK1-201ENST00000530758 C9orf47Q6ZRZ4 202 aa11.74□□□□□ -0.53
BRK1-201ENST00000530758 ASCL2Q99929 193 aa11.74□□□□□ -0.53
BRK1-201ENST00000530758 NKX6-2Q9C056 277 aaPredicted RBP11.74□□□□□ -0.53
BRK1-201ENST00000530758 TP53TG1Q9Y2A0 90 aa11.74□□□□□ -0.53
BRK1-201ENST00000530758 ARL2-SNX15V9GYD0 113 aa11.74□□□□□ -0.53
BRK1-201ENST00000530758 NPIPB6E9PJ23 425 aa11.73□□□□□ -0.53
BRK1-201ENST00000530758 SLC25A5P05141 298 aaKnown RBP11.73□□□□□ -0.53
BRK1-201ENST00000530758 PMS2P11Q13670 270 aa11.73□□□□□ -0.53
BRK1-201ENST00000530758 CSNK1G2-AS1Q8NCQ2 148 aa11.73□□□□□ -0.53
BRK1-201ENST00000530758 OR4B1Q8NGF8 309 aa11.73□□□□□ -0.53
BRK1-201ENST00000530758 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
BRK1-201ENST00000530758 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
BRK1-201ENST00000530758 ODF3Q96PU9 254 aa11.73□□□□□ -0.53
BRK1-201ENST00000530758 DIRC3C9JPN6 131 aa11.72□□□□□ -0.53
BRK1-201ENST00000530758 ZNF705DP0CH99 300 aaPredicted RBP11.72□□□□□ -0.53
BRK1-201ENST00000530758 ZNF705BP0CI00 300 aaPredicted RBP11.72□□□□□ -0.53
BRK1-201ENST00000530758 CSN1S1P47710 185 aa11.72□□□□□ -0.53
BRK1-201ENST00000530758 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
BRK1-201ENST00000530758 ALKAL2Q6UX46 152 aa11.72□□□□□ -0.53
BRK1-201ENST00000530758 RNF183Q96D59 192 aa11.72□□□□□ -0.53
BRK1-201ENST00000530758 SPATA25Q9BR10 227 aa11.72□□□□□ -0.53
BRK1-201ENST00000530758 C1QTNF4Q9BXJ3 329 aa11.72□□□□□ -0.53
BRK1-201ENST00000530758 PPP1R14DQ9NXH3 145 aa11.72□□□□□ -0.53
BRK1-201ENST00000530758 FAM74A7A6NL05 159 aa11.71□□□□□ -0.53
BRK1-201ENST00000530758 PPT1P50897 306 aa11.71□□□□□ -0.53
BRK1-201ENST00000530758 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
BRK1-201ENST00000530758 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.53
BRK1-201ENST00000530758 LYPD6BQ8NI32 183 aa11.71□□□□□ -0.53
BRK1-201ENST00000530758 FAM19A4Q96LR4 140 aa11.71□□□□□ -0.53
BRK1-201ENST00000530758 AGPAT4-IT1Q9H0P7 198 aa11.71□□□□□ -0.53
BRK1-201ENST00000530758 ZMAT4Q9H898 229 aa11.71□□□□□ -0.53
BRK1-201ENST00000530758 YTHDF2Q9Y5A9 579 aaKnown RBP11.71□□□□□ -0.53
BRK1-201ENST00000530758 TRBV7-9A0A0J9YWB2 115 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 TEX46H3BTG2 121 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 CA1P00915 261 aaPredicted RBP11.7□□□□□ -0.54
BRK1-201ENST00000530758 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 HBE1P02100 147 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 AMBPP02760 352 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 TEX261Q6UWH6 196 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 CCDC28AQ8IWP9 274 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 OVOL2Q9BRP0 275 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
BRK1-201ENST00000530758 ZNF705EA8MWA4 302 aaPredicted RBP11.69□□□□□ -0.54
BRK1-201ENST00000530758 CT45A10P0DMU9 189 aa11.69□□□□□ -0.54
BRK1-201ENST00000530758 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
BRK1-201ENST00000530758 CCL20P78556 96 aa11.69□□□□□ -0.54
BRK1-201ENST00000530758 IQCF2Q8IXL9 164 aa11.69□□□□□ -0.54
BRK1-201ENST00000530758 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
BRK1-201ENST00000530758 NBEAL2Q6ZNJ1 2754 aa11.69□□□□□ -0.54
BRK1-201ENST00000530758 CRXO43186 299 aaPredicted RBP11.68□□□□□ -0.54
BRK1-201ENST00000530758 SPRY2O43597 315 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 321.9 ms