RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 MRPL23Q16540 153 aaKnown RBP12.69□□□□□ -0.38
SSRP1-204ENST00000529002 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
SSRP1-204ENST00000529002 SMIM4Q8WVI0 70 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 ST6GAL2Q96JF0 529 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 ARV1Q9H2C2 271 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 PRO0255Q9UI72 69 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
SSRP1-204ENST00000529002 E5RGE8 158 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 PSCAO43653 123 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 MED6O75586 246 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 CD300CQ08708 224 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 MORN5Q5VZ52 161 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 Q8N814 137 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 SLC50A1Q9BRV3 221 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 HHLA3Q9XRX5 114 aa12.68□□□□□ -0.38
SSRP1-204ENST00000529002 RRAS2P62070 204 aaPredicted RBP12.67□□□□□ -0.38
SSRP1-204ENST00000529002 RPP30P78346 268 aaKnown RBP12.67□□□□□ -0.38
SSRP1-204ENST00000529002 BTN1A1Q13410 526 aa12.67□□□□□ -0.38
SSRP1-204ENST00000529002 Q6ZQT7 251 aa12.67□□□□□ -0.38
SSRP1-204ENST00000529002 ZNF680Q8NEM1 530 aa12.67□□□□□ -0.38
SSRP1-204ENST00000529002 C15orf40Q8WUR7 153 aa12.67□□□□□ -0.38
SSRP1-204ENST00000529002 CIB3Q96Q77 187 aaPredicted RBP12.67□□□□□ -0.38
SSRP1-204ENST00000529002 C7orf71A4D174 169 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 H3BQ15 152 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 K7EQD1 137 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 CTDSP2O14595 271 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 ANXA3P12429 323 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 CXCL2P19875 107 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 TCL1AP56279 114 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 SRPXP78539 464 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 SLC38A11Q08AI6 406 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 ERCC8Q13216 396 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 AP3S1Q92572 193 aa12.66□□□□□ -0.38
SSRP1-204ENST00000529002 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
SSRP1-204ENST00000529002 ZNF415Q09FC8 603 aa12.65□□□□□ -0.38
SSRP1-204ENST00000529002 LINC00305Q7Z4B0 112 aa12.65□□□□□ -0.38
SSRP1-204ENST00000529002 EIF4E3Q8N5X7 224 aaKnown RBP12.65□□□□□ -0.38
SSRP1-204ENST00000529002 VCX3AQ9NNX9 186 aa12.65□□□□□ -0.38
SSRP1-204ENST00000529002 MCUBQ9NWR8 336 aa12.65□□□□□ -0.38
SSRP1-204ENST00000529002 A0A087WXM4 84 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 ANKRD20A5PA0PJZ0 165 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 SFTA3P0C7M3 94 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 SRIP30626 198 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 KRTAP10-4P60372 401 aaPredicted RBP12.64□□□□□ -0.39
SSRP1-204ENST00000529002 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
SSRP1-204ENST00000529002 SCGB3A2Q96PL1 93 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 ODF3Q96PU9 254 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 Q9HAA7 133 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 SCP2D1Q9UJQ7 156 aa12.64□□□□□ -0.39
SSRP1-204ENST00000529002 DUXBA0A1W2PPF3 345 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 RGS5O15539 181 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 SLC25A5P05141 298 aaKnown RBP12.63□□□□□ -0.39
SSRP1-204ENST00000529002 HOXB5P09067 269 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 SLC25A6P12236 298 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 RNASE4P34096 147 aaKnown RBP12.63□□□□□ -0.39
SSRP1-204ENST00000529002 SELENOTP62341 195 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 MRPS10P82664 201 aaKnown RBP12.63□□□□□ -0.39
SSRP1-204ENST00000529002 WFDC2Q14508 124 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 ANXA2RQ3ZCQ2 193 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 Q6ZSA8 131 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 VGLL1Q99990 258 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 MRPL32Q9BYC8 188 aaKnown RBP12.63□□□□□ -0.39
SSRP1-204ENST00000529002 RABL2BQ9UNT1 228 aa12.63□□□□□ -0.39
SSRP1-204ENST00000529002 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
SSRP1-204ENST00000529002 GYPEP15421 78 aa12.62□□□□□ -0.39
SSRP1-204ENST00000529002 OPCMLQ14982 345 aa12.62□□□□□ -0.39
SSRP1-204ENST00000529002 CTF1Q16619 201 aa12.62□□□□□ -0.39
SSRP1-204ENST00000529002 BPIFA4PQ86YQ2 179 aa12.62□□□□□ -0.39
SSRP1-204ENST00000529002 RCL1Q9Y2P8 373 aaKnown RBP12.62□□□□□ -0.39
SSRP1-204ENST00000529002 TRAV5A0A0B4J249 113 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 TRGV4A0A0C4DH28 118 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 KLLNB2CW77 178 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 K7EP13 123 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 M0R3E3 92 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 C1QBP02746 253 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 VAMP1P23763 118 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 POLR2GP62487 172 aaKnown RBP eCLIP12.61□□□□□ -0.39
SSRP1-204ENST00000529002 IL18Q14116 193 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 PRR9Q5T870 116 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 TMEM37Q8WXS4 190 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 ZNF479Q96JC4 524 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 PSENENQ9NZ42 101 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 PXMP4Q9Y6I8 212 aa12.61□□□□□ -0.39
SSRP1-204ENST00000529002 SLAQ13239 276 aa12.6□□□□□ -0.39
SSRP1-204ENST00000529002 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
SSRP1-204ENST00000529002 LRTM2Q8N967 370 aa12.6□□□□□ -0.39
SSRP1-204ENST00000529002 LOC100131303A0A0U1RQF7 123 aa12.59□□□□□ -0.39
SSRP1-204ENST00000529002 MPDU1O75352 247 aa12.59□□□□□ -0.39
SSRP1-204ENST00000529002 OXTP01178 125 aa12.59□□□□□ -0.39
SSRP1-204ENST00000529002 METTL15P1P0C7V9 234 aa12.59□□□□□ -0.39
SSRP1-204ENST00000529002 SCXQ7RTU7 201 aa12.59□□□□□ -0.39
SSRP1-204ENST00000529002 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
SSRP1-204ENST00000529002 AGPAT4-IT1Q9H0P7 198 aa12.59□□□□□ -0.39
SSRP1-204ENST00000529002 CCDC59Q9P031 241 aaKnown RBP12.59□□□□□ -0.39
SSRP1-204ENST00000529002 GOSR2O14653 212 aa12.58□□□□□ -0.4
SSRP1-204ENST00000529002 CTDSPLO15194 276 aa12.58□□□□□ -0.4
SSRP1-204ENST00000529002 OR4E1P0C645 316 aa12.58□□□□□ -0.4
SSRP1-204ENST00000529002 TMEM128Q5BJH2 165 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms