RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 HIST1H1EP10412 219 aaKnown RBP9.4□□□□□ -0.9
SCN3B-205ENST00000528267 PSG3Q16557 428 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 AMTNQ6UX39 209 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 EXOC3-AS1Q8N2X6 119 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 FAM213BQ8TBF2 198 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 BLNKQ8WV28 456 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 PAXXQ9BUH6 204 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 CSTL1Q9H114 145 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
SCN3B-205ENST00000528267 STAB2Q8WWQ8 2551 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 ZNF253O75346 499 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 CA1P00915 261 aaPredicted RBP9.39□□□□□ -0.91
SCN3B-205ENST00000528267 CDC34P49427 236 aaPredicted RBP9.39□□□□□ -0.91
SCN3B-205ENST00000528267 APOC4P55056 127 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 FXYD7P58549 80 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 RHOBP62745 196 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 SAMD13Q5VXD3 122 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 DPPA3Q6W0C5 159 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 COMMD7Q86VX2 200 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 CSNK1G2-AS1Q8NCQ2 148 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 ZNF738Q8NE65 137 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 SLC50A1Q9BRV3 221 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 SLC35B3Q9H1N7 401 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 U3KQK5 164 aa9.39□□□□□ -0.91
SCN3B-205ENST00000528267 OR7C2O60412 319 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 ATP6V1G1O75348 118 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 NBEAP1P0C6P0 100 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 CNN1P51911 297 aaKnown RBP9.38□□□□□ -0.91
SCN3B-205ENST00000528267 TMEM41BQ5BJD5 291 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 RAB24Q969Q5 203 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 RNF183Q96D59 192 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
SCN3B-205ENST00000528267 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
SCN3B-205ENST00000528267 MBP02144 154 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 FHITP49789 147 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 UBE2L3P68036 154 aaKnown RBP9.37□□□□□ -0.91
SCN3B-205ENST00000528267 PDE6HQ13956 83 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 GUK1Q16774 197 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 KHDC3LQ587J8 217 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 Q6ZWC4 215 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 OR4B1Q8NGF8 309 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 OR8A1Q8NGG7 326 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
SCN3B-205ENST00000528267 ZMAT4Q9H898 229 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 EDA2RQ9HAV5 297 aa9.37□□□□□ -0.91
SCN3B-205ENST00000528267 CSMD3Q7Z407 3707 aa9.36□□□□□ -0.91
SCN3B-205ENST00000528267 TEX46H3BTG2 121 aa9.36□□□□□ -0.91
SCN3B-205ENST00000528267 UBE2CO00762 179 aa9.36□□□□□ -0.91
SCN3B-205ENST00000528267 CRXO43186 299 aaPredicted RBP9.36□□□□□ -0.91
SCN3B-205ENST00000528267 ARL14EPLP0DKL9 152 aa9.36□□□□□ -0.91
SCN3B-205ENST00000528267 HIST1H1AQ02539 215 aaPredicted RBP9.36□□□□□ -0.91
SCN3B-205ENST00000528267 SUN5Q8TC36 379 aa9.36□□□□□ -0.91
SCN3B-205ENST00000528267 CLUHP3Q96NS8 147 aa9.36□□□□□ -0.91
SCN3B-205ENST00000528267 A0A1W2PPV4 95 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 SPRY2O43597 315 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
SCN3B-205ENST00000528267 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 TAS2R45P59539 299 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 ICAM4Q14773 271 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 RBMY1FQ15415 496 aaKnown RBP9.35□□□□□ -0.91
SCN3B-205ENST00000528267 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 MORN3Q6PF18 240 aaPredicted RBP9.35□□□□□ -0.91
SCN3B-205ENST00000528267 LYPD6BQ8NI32 183 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
SCN3B-205ENST00000528267 PLECQ15149 4684 aaKnown RBP9.34□□□□□ -0.91
SCN3B-205ENST00000528267 M0R2Z0 102 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 HBE1P02100 147 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 GCHFRP30047 84 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 PSG9Q00887 426 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 ERCC8Q13216 396 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 ACTR3CQ9C0K3 210 aaPredicted RBP9.34□□□□□ -0.91
SCN3B-205ENST00000528267 Q9H3A6 140 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 TMPRSS5Q9H3S3 457 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 X6R8D5 127 aa9.34□□□□□ -0.91
SCN3B-205ENST00000528267 IGKV2-40A0A087WW87 121 aaPredicted RBP9.33□□□□□ -0.92
SCN3B-205ENST00000528267 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
SCN3B-205ENST00000528267 NPIPB6E9PJ23 425 aa9.33□□□□□ -0.92
SCN3B-205ENST00000528267 IGKV2D-40P01614 121 aaPredicted RBP9.33□□□□□ -0.92
SCN3B-205ENST00000528267 CT45A10P0DMU9 189 aa9.33□□□□□ -0.92
SCN3B-205ENST00000528267 FGF8P55075 233 aaPredicted RBP9.33□□□□□ -0.92
SCN3B-205ENST00000528267 RANP62826 216 aaKnown RBP9.33□□□□□ -0.92
SCN3B-205ENST00000528267 C1orf158Q8N1D5 194 aa9.33□□□□□ -0.92
SCN3B-205ENST00000528267 SFT2D1Q8WV19 159 aa9.33□□□□□ -0.92
SCN3B-205ENST00000528267 MBD3L1Q8WWY6 194 aa9.33□□□□□ -0.92
SCN3B-205ENST00000528267 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
SCN3B-205ENST00000528267 TRAV12-2A0A075B6T6 113 aa9.32□□□□□ -0.92
SCN3B-205ENST00000528267 TRAV1-1A0A0B4J248 108 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms