RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 MBD2Q9UBB5 411 aa8.67□□□□□ -1.02
TRAPPC4-209ENST00000528230 DKK2Q9UBU2 259 aa8.67□□□□□ -1.02
TRAPPC4-209ENST00000528230 APLNQ9ULZ1 77 aa8.67□□□□□ -1.02
TRAPPC4-209ENST00000528230 PRELID1Q9Y255 219 aa8.67□□□□□ -1.02
TRAPPC4-209ENST00000528230 SACSQ9NZJ4 4579 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 DEFB131BA0A096LNP1 70 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 LOC102723971A0A1B0GUV8 181 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 IGLL5B9A064 214 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 IFNA5P01569 189 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 TSPOP30536 169 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 EMP1P54849 157 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 GCSAMLQ5JQS6 135 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 SCGB1C1Q8TD33 95 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 C20orf144Q9BQM9 153 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 PARD6GQ9BYG4 376 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 MED28Q9H204 178 aa8.66□□□□□ -1.02
TRAPPC4-209ENST00000528230 LYSTQ99698 3801 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 TRAV12-2A0A075B6T6 113 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 NDUFB4O95168 129 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 FAM222AQ5U5X8 452 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 BAP18Q8IXM2 172 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 ASB13Q8WXK3 278 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 FAM167A-AS1Q96KT0 104 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 ODF3Q96PU9 254 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 SLC25A2Q9BXI2 301 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 OR51M1Q9H341 326 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 FUT9Q9Y231 359 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 YTHDF2Q9Y5A9 579 aaKnown RBP8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 TIMM9Q9Y5J7 89 aa8.65□□□□□ -1.02
TRAPPC4-209ENST00000528230 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 NPIPB6E9PJ23 425 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 NBEAP1P0C6P0 100 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 PYYP10082 97 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 TAS2R60P59551 318 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 ZNF767PQ75MW2 155 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 MIR17HGQ75NE6 70 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 RPP25LQ8N5L8 163 aaKnown RBP8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 LINC01587Q99440 93 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
TRAPPC4-209ENST00000528230 LYRM9A8MSI8 78 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 ZNF705GA8MUZ8 300 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 H7BYZ3 331 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 FCN2Q15485 313 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 FFAR4Q5NUL3 377 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 ZNF493Q6ZR52 646 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 BLNKQ8WV28 456 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 FAM210BQ96KR6 192 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 LINC00477Q96M19 166 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 PAXXQ9BUH6 204 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 SMIM3Q9BZL3 60 aa8.63□□□□□ -1.03
TRAPPC4-209ENST00000528230 RYR2Q92736 4967 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 M0R3E3 92 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 CT45A10P0DMU9 189 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 LEPP41159 167 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 LYPD1Q8N2G4 141 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 RNF141Q8WVD5 230 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 FXYD5Q96DB9 178 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 WFDC1Q9HC57 220 aa8.62□□□□□ -1.03
TRAPPC4-209ENST00000528230 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 PLAC8L1A1L4L8 177 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 PRM2P04554 102 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 GIPP09681 153 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 PRB4P10163 310 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 AZU1P20160 251 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 TAS2R45P59539 299 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 DAD1P61803 113 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 ICAM4Q14773 271 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 C9orf47Q6ZRZ4 202 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 EXOC3-AS1Q8N2X6 119 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 C16orf74Q96GX8 76 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 AQP10Q96PS8 301 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 NDUFAF3Q9BU61 184 aa8.61□□□□□ -1.03
TRAPPC4-209ENST00000528230 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 OR7C2O60412 319 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 SLC25A5P05141 298 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 NMBP08949 121 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 ZNF266Q14584 549 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 KIR3DS1Q14943 382 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 RGS21Q2M5E4 152 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 ACOT6Q3I5F7 207 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 KHDC3LQ587J8 217 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 TMEM263Q8WUH6 116 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 ZNF503Q96F45 646 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 FAM19A4Q96LR4 140 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 AGPAT4-IT1Q9H0P7 198 aa8.6□□□□□ -1.03
TRAPPC4-209ENST00000528230 OR10J4P0C629 311 aa8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 HTN1P15515 57 aa8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 CRISP2P16562 243 aa8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 M6PRP20645 277 aa8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 CCDC28AQ8IWP9 274 aa8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 RNASE8Q8TDE3 154 aaKnown RBP8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 PYGO2Q9BRQ0 406 aa8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 TIMM8BQ9Y5J9 83 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC4-209ENST00000528230 ALMS1Q8TCU4 4167 aa8.58□□□□□ -1.04
TRAPPC4-209ENST00000528230 TRBV7-9A0A0J9YWB2 115 aa8.58□□□□□ -1.04
TRAPPC4-209ENST00000528230 A0A1W2PPV4 95 aa8.58□□□□□ -1.04
TRAPPC4-209ENST00000528230 KLLNB2CW77 178 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms